DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and Cytip

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_631939.1 Gene:Cytip / 227929 MGIID:2183535 Length:359 Species:Mus musculus


Alignment Length:343 Identity:71/343 - (20%)
Similarity:115/343 - (33%) Gaps:80/343 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 SSMQGSTTSSASSDVMTLTTTAASSWCAIPASSRLRVLRLVRP--------HQRRLLVGGPERGS 83
            |.:.|..|...:..:..|..|.|:    :|...  :.|.|.|.        .||:::....:...
Mouse    28 SVLTGQLTMEDNRRIQVLADTVAT----LPRGR--KQLALARSSSLGDFSWSQRKVVTVEKQDNG 86

  Fly    84 TYGFTVRGGREHGTGF-------FVSHVEHGGEAHLKGLRIGDQILRINGFRLDDAVHKEFIQLV 141
            |:||.::..|......       .:..|:....||..||::||....:||...:...||:.:.|:
Mouse    87 TFGFEIQTYRLQNQNICSSEVCTMICKVQEDSPAHCAGLQVGDIFANVNGVSTEGFTHKQVVDLI 151

  Fly   142 AGQDRV--------------------------TLKVRGVGMLPVRDLPEER-LSWSVVKLPSVSG 179
            .....:                          |||.:.|.:..:. |.|:| |.......|::..
Mouse   152 RSSGNLLTIETLNGTMIHRRAELEAKLQTLKQTLKKKWVELRSLH-LQEQRLLHGDTANSPNLEN 215

  Fly   180 TP-SESSFKGERRGASRDISVVLHVAPRTKLGL-GICKGPEWKPGIFVQFTKDRSVAREAGLRPG 242
            .. .|||..|...|.|..:      ..|.:|.. ..||  .|...:        :|..|.|.|..
Mouse   216 MDLDESSLFGNLLGPSPAL------LDRHRLSSESSCK--SWLSSL--------TVDSEDGYRSS 264

  Fly   243 DQILSVNSIDFSDVLFSEAVAVMKSSSKLDMVVRTAAGCDLFPGESSGYNSSAS-SVTGDQSPCW 306
               :|.:||         ..|..:.:|..|....:..|.::....||..|.|.| :.:|..||.|
Mouse   265 ---MSEDSI---------RGAFSRQTSTDDECFHSKDGDEILRNASSRRNRSISVTSSGSFSPLW 317

  Fly   307 ADAKSKRLTAVREESGAG 324
            ....|.....:..:|..|
Mouse   318 ESNYSSVFGTLPRKSRRG 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 19/102 (19%)
PDZ_signaling 197..276 CDD:238492 15/79 (19%)
CytipNP_631939.1 PDZ_signaling 76..161 CDD:238492 16/84 (19%)
Interaction with CYTH1. /evidence=ECO:0000250 166..188 3/21 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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