DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and F28E10.4

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_500590.2 Gene:F28E10.4 / 185067 WormBaseID:WBGene00017902 Length:324 Species:Caenorhabditis elegans


Alignment Length:221 Identity:58/221 - (26%)
Similarity:79/221 - (35%) Gaps:46/221 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 SVAREAGLRPGDQILSVNSIDFS------DVLFSEAVAVMKSSSKLDMVVRTAAGCDLFPGESSG 290
            |..||..|.|....:....:.||      |:..::||.:     :.||.|........|.|...|
 Worm     2 SKKRELWLTPAPATVGQVRVVFSFKLSNHDIGKTDAVKI-----EDDMTVSYICSNSFFNGLIMG 61

  Fly   291 YN-SSASSVTGDQSPCWAD-----------AKSKRLTAVREESGAGGGGCGLSSAPGAGSPNWSQ 343
            .. ...::|:|..|.|.::           ::.|.:|.|..|..| ..||.|..    |...:..
 Worm    62 DKIIRVNNVSGSASRCQSELLRGTACNVEVSRRKGVTPVTCERLA-KSGCNLRK----GHACFVL 121

  Fly   344 GVEVHKQMNKT-------IIKLTENGTSINNTYIASTGGSSVSGSGSTGSGTSGRSQQSQSNPSN 401
            .||....|..|       |||.....|.::...||    ||..|.|.:....||.......||.|
 Worm   122 DVERPPHMTTTSVGLKLGIIKRRAFVTKVDPNTIA----SSFFGCGDSIMDMSGAPIPMTDNPDN 182

  Fly   402 -----PSRNSTTMKRSHL--RPVNSA 420
                 .||.||..|.|.|  ||::.|
 Worm   183 FIREHLSRLSTGAKVSFLVERPISVA 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492
PDZ_signaling 197..276 CDD:238492 12/49 (24%)
F28E10.4NP_500590.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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