DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and F20D6.1

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_505110.2 Gene:F20D6.1 / 184722 WormBaseID:WBGene00017633 Length:180 Species:Caenorhabditis elegans


Alignment Length:190 Identity:41/190 - (21%)
Similarity:67/190 - (35%) Gaps:66/190 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 VVLHVAPRTKLGLGICKGPEWKPGIFVQFTKDR--SVAREAGLRPGDQILSVNSIDFSD------ 255
            :||...||:|||:.:   ..::..::|:.|.:.  |..|.. |..||.||.::..:..|      
 Worm     5 LVLIYFPRSKLGINV---KSYQNVVYVESTDNTWGSTTRRF-LYLGDAILRIDDTEILDLPTTQN 65

  Fly   256 -------------VLFSEAV---------AVMKSSSKLDM-----VVRT-------------AAG 280
                         ::...||         :||..|..||.     |::|             |..
 Worm    66 ALRTGFSKNGVVTIIVERAVHQESYAFVRSVMGFSKVLDPMLPQDVIQTCTARLAYHNKHGFAEP 130

  Fly   281 CDLFPGESSGYNSSAS-SVTGDQSPCWADAKSKRLTAVREESGAGGGGCGLSSAPGAGSP 339
            ..:|.|.:..|:|:.. |||..     .:.||.|...:..|.        |.:.|...:|
 Worm   131 TPIFKGYTKDYSSAGRVSVTNT-----VEIKSIRTEQLNPEI--------LQNVPDFSNP 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492
PDZ_signaling 197..276 CDD:238492 25/111 (23%)
F20D6.1NP_505110.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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