DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and mics-1

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_001343863.1 Gene:mics-1 / 179475 WormBaseID:WBGene00011890 Length:293 Species:Caenorhabditis elegans


Alignment Length:186 Identity:44/186 - (23%)
Similarity:78/186 - (41%) Gaps:55/186 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 SSASSDVMTL--TTTAASSWCAIPASSRLRVLRLVRPHQRRLLVGGPERGSTYGFTVRGGREH-- 95
            ::.::|.||.  |||..:...::|    |..|.:|.       :....:|  :||.:.||.::  
 Worm    44 AAEATDDMTFNDTTTDGNGQESVP----LEALTVVE-------IEKTSKG--FGFNIVGGTDNPH 95

  Fly    96 ---GTGFFVSHVEHGGEAHLKG-LRIGDQILRINGFRLDDAVHKEFIQLVAGQDRVTLKVRGVG- 155
               ..|.:||.|  ..|:...| :|.||:||..:|..:....|.|.:::..     ::|:..|. 
 Worm    96 FVGDIGIYVSSV--NSESKSYGVVRTGDKILSFDGIDMTYKTHDEAVEVFR-----SVKIGHVAK 153

  Fly   156 MLPVRD---LPEERLSWSVVKLPSVSGTPSESSFKGERRGASRDISVVLHVAPRTK 208
            ||..|:   |.|:|           :.||:.|            :|:...|.|:|:
 Worm   154 MLIDREYLHLQEDR-----------TQTPTAS------------VSITPQVTPQTR 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 20/75 (27%)
PDZ_signaling 197..276 CDD:238492 4/12 (33%)
mics-1NP_001343863.1 PDZ_signaling 71..145 CDD:238492 21/89 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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