DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and smz-2

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_491965.1 Gene:smz-2 / 172415 WormBaseID:WBGene00020661 Length:274 Species:Caenorhabditis elegans


Alignment Length:185 Identity:43/185 - (23%)
Similarity:71/185 - (38%) Gaps:49/185 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 LRIGDQILRINGFRLDDAVHKEF---IQLVAGQDRVTLKVRGVGMLPVRD------------LPE 164
            ||||||:.::||....|.  .:|   ::..|...::|:.         ||            :||
 Worm    42 LRIGDQVKKVNGQNCKDC--NDFFRALRFAAPCAKITVN---------RDEKKAEELEARVHIPE 95

  Fly   165 ERLSWSVVKLPSVSGTPSESSFKGERRGASRDISVVLHVAPRTKLGLGICKGPEWKPGIFVQFTK 229
            :|.  .:::               .|.|...:::.::.|....||||||   ..::..:.|....
 Worm    96 DRA--KIIQ---------------RREGYVYELATLVWVQNGPKLGLGI---KHFQNRVLVSRVD 140

  Fly   230 DRSVAREAGLRPGDQILSVNSIDFS--DVLFSEAVAVMKSSSKLDMVVRTAAGCD 282
            ..|:| |..|..||.:..|:.|..|  ||.....|..::...|:..||......|
 Worm   141 PGSLA-EKCLVLGDHLCDVDGIPVSDKDVARDLLVKNIQEKGKVTFVVERPDSID 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 12/39 (31%)
PDZ_signaling 197..276 CDD:238492 22/80 (28%)
smz-2NP_491965.1 PDZ_signaling 7..77 CDD:238492 11/36 (31%)
PDZ_signaling 114..188 CDD:238492 22/77 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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