DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5921 and Grip2

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_612544.2 Gene:Grip2 / 171571 RGDID:621668 Length:1043 Species:Rattus norvegicus


Alignment Length:1130 Identity:204/1130 - (18%)
Similarity:327/1130 - (28%) Gaps:481/1130 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 AIPASSR-LRVLRLVRPHQRRLLVGGPERGSTYGFTVRGGREHGTGFFVSHVEHGG-EAHLKGLR 116
            :||...| :.::.|::           ..|||.|.|:.||.:......||::..|| .|....|.
  Rat    43 SIPEEFRGITMVELIK-----------REGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLN 96

  Fly   117 IGDQILRINGFRLDDAVHKEFIQLVAG-QDRVTLKV----------------------------- 151
            :||.|..:||.||....|.|.|.|:.. .:||.|:|                             
  Rat    97 VGDYIRSVNGIRLTRLRHDEIITLLKNVGERVVLEVEYELPPPAPENNPRIISKTVDVSLYKEGN 161

  Fly   152 ------RG-------------------------VGMLPVRDLPEERLSWSVVKLPSVSGTP---- 181
                  ||                         .|.|.|.|           :|.|:.|.|    
  Rat   162 SFGFVLRGGAHEDLHKSRPLVLTYVRPGGPADREGSLKVGD-----------RLLSIDGIPLHGA 215

  Fly   182 -------------SESSFKGERRGASRDI------SVVLHVA--PRTKLGLGICKGPEW-KPGIF 224
                         .|:.|:.|...|:.|.      .:|:.:|  |.:.||:.:..|... ||.|.
  Rat   216 SHATAIATLQQCSHEALFQVEYDVATPDTVANASGPLVVEIAKTPGSALGISLTTGSHRNKPAIT 280

  Fly   225 VQFTKDRSVA-REAGLRPGDQILSVNSIDFSDVLFSEAVAVMKSSS---KLDMVVRTAAGCDLFP 285
            :...|..||. |...|..||.||:::..........||..::.|.:   :|:::....:...|.|
  Rat   281 IDRIKPASVVDRSGALHAGDHILAIDGTSTEHCSLVEATKLLASVTEKVRLEILPAPQSRRPLKP 345

  Fly   286 GESSGYNSSASSVTGDQSPCWADAKSKRLTAVREESGAGGGGCGLSSAPGAGSPNWSQGVEVHKQ 350
            .|:.....|......|  ||.....|.|.:..|                   :|.|:.|.:    
  Rat   346 PEAVRIQRSEQLHHWD--PCVPSCHSPRPSHCR-------------------APTWAPGGQ---- 385

  Fly   351 MNKTIIKLTENGTSINNTYIASTGGSSVSGSGSTGSGTSGRSQQSQSNPSNPSRNSTTMKRSHLR 415
                     :...|:::|..:|                      ...||:.|..|::|:.|..:.
  Rat   386 ---------DQSRSVSSTPFSS----------------------PTMNPAFPCANASTLPRGPMS 419

  Fly   416 PVNSAG----------SGIGLSSGSAGSAGS-----------AGS--SGSGSR-SGGVIAPAPAP 456
            |..:||          |.:.|:|.:.|..|.           .|.  ||.|.: .||:.|.....
  Rat   420 PRTTAGRRRQRRKEHRSSLSLASSTVGPGGQIVHTETTEVVLCGDPLSGFGLQLQGGIFATETLS 484

  Fly   457 PPP------------------------AMN---------EGAN---------------------- 466
            .||                        |:|         |.||                      
  Rat   485 SPPLVRFIEPDSPAERCGLLQVGDRVLAINGIATEDGTMEEANQLLRDAALARKVVLEIEFDVAE 549

  Fly   467 ----ASGSV--------GSSLSSAITEELKKRKE-------KQQQQQHQQRHNRDRD-------- 504
                :||:.        |..|...|:...:||.|       |:....|:.......|        
  Rat   550 SVIPSSGTFHVKLPKRRGVELGITISSASRKRGEPLIISDIKKGSVAHRTGTLEPGDKLLAIDNI 614

  Fly   505 --------------RDGNGNVDRQLTGHNGNGGHRSSVGQVSHRQRANVAG--VAATLQGSER-- 551
                          |.....|..::.....|...:.|.|.||:.......|  :..|:.|:|.  
  Rat   615 RLDHCPMEYAVQILRQCEDLVKLKIRKDEDNSDEQESSGAVSYTVELKRYGGPLGITISGTEEPF 679

  Fly   552 ----ISNLTGGGGAGGAGGSNGAAGAGGDQHTALMDEFKRAHQRMFRNGFHESEHKLSSLGKSSL 612
                ||.||..|.|...|..:     .||:..|:                            :|:
  Rat   680 DPIIISGLTKRGLAERTGAIH-----VGDRILAI----------------------------NSV 711

  Fly   613 ADRSLYGREMS----LLRVKNGGSGGGEGSGVMPTMR-PVSMGRPLV---------TMSTYQERG 663
               ||.||.:|    ||:|          :|...|:: ...:.|||:         .....::..
  Rat   712 ---SLKGRPLSEAIHLLQV----------AGETVTLKIKKQLDRPLLPRQSGSLSEASDVDEDPP 763

  Fly   664 ETLK----RTSIMPD----ESCYRNSINSNNNNGFSRNRSNSNTNNNNRLQSQNGVNPANGNGSP 720
            |.||    .|...|.    :|...:..:|....||.                      .:|:.:|
  Rat   764 EALKGGLLTTHFSPAVPSVDSAVESWGSSATEGGFG----------------------GSGSYTP 806

  Fly   721 EL---PPPPPQFANPQPKQMPPQHIKPMTGNAAANGSGSANGLGNGSLAKVRQPMSPMRSA---- 778
            ::   ...|.::.:.:.|..||                               |:.|.|::    
  Rat   807 QVAVRSVTPQEWRSSRLKSSPP-------------------------------PLEPRRTSYTPG 840

  Fly   779 -------SISVGGFRPPATPQP-----------------------------DYDAVQIRSSQGSE 807
                   ....|.:.||.:|.|                             :.:|..:..:..|.
  Rat   841 PTDESFPEEEEGDWEPPMSPAPGPAREEGFWRVLGEALEDLESCGQSELLRELEASIMTGTVQSV 905

  Fly   808 SVSG----------RDVATSQQQRRTLRLGTVTIGEYGDQRTTGKRETLRKTNGEPASNGILKNG 862
            :|.|          |:|.||.:..:.|.|.|    .....|.|..::.:|...|...|:|:|:.|
  Rat   906 AVDGRPGSRPWRRSREVGTSPEDLQELLLPT----PLEMHRVTLHKDPVRNDFGFSVSDGLLEKG 966

  Fly   863 ----SNRSSASFNHGSSHQTEKTIK 883
                :.|......||.....::.::
  Rat   967 VYVHTVRIDGPAQHGGLQPFDRLLQ 991

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 28/106 (26%)
PDZ_signaling 197..276 CDD:238492 22/91 (24%)
Grip2NP_612544.2 PDZ_signaling 51..133 CDD:238492 28/92 (30%)
PDZ_signaling 153..236 CDD:238492 12/93 (13%)
PDZ_signaling 251..334 CDD:238492 22/82 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 371..450 21/132 (16%)
PDZ_signaling 456..544 CDD:238492 14/87 (16%)
PDZ_signaling 557..640 CDD:238492 11/82 (13%)
PDZ_signaling 657..737 CDD:238492 25/125 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 745..769 3/23 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 786..863 16/129 (12%)
PDZ_signaling 941..1020 CDD:238492 11/51 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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