DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and Lnx1

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:NP_001153049.1 Gene:Lnx1 / 16924 MGIID:1278335 Length:728 Species:Mus musculus


Alignment Length:327 Identity:87/327 - (26%)
Similarity:122/327 - (37%) Gaps:80/327 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GFFVSHVEHGGEAHLKG-LRIGDQILRINGFRL-----DDAVHKEFIQLVAGQDRVTLKVRGVGM 156
            |.|:.:|.:||.|...| |...|::|.|||..|     :.|.|  .||  |.:.||.|.|.....
Mouse   409 GVFIFNVLNGGVADRHGQLEENDRVLAINGHDLRFGSPESAAH--LIQ--ASERRVHLVVSRQVR 469

  Fly   157 LPVRDLPEERLSWSVVKLPSVSGTPSESSFKGERRGASRDIS------VVLHVAPRTKLGLGICK 215
            ....|:.:| ..|        .....:|...|||..||:..:      |.:...|...||:.:..
Mouse   470 QSSPDIFQE-AGW--------ISNGQQSPGPGERNTASKPAATCHEKVVSVWKDPSESLGMTVGG 525

  Fly   216 GP---EWKPGIFVQFTKDRSV-AREAGLRPGDQILSVNSIDFSDVLFSEAVAVMKSSS-----KL 271
            |.   ||...|:|...:...| :|:..::.||.:|:||.|:.::|..:||||::||:.     |.
Mouse   526 GASHREWDLPIYVISVEPGGVISRDGRIKTGDILLNVNGIELTEVSRTEAVAILKSAPSSVVLKA 590

  Fly   272 DMVVRTAAGCDLFPGE-SSGYNSSASSVT--GDQSPCWA-------------DAKSKRLTAVREE 320
            ..|....|..|..|.. .|.:|     ||  ||.||.|.             |...:|.||    
Mouse   591 LEVKEQEAQEDCSPAALDSNHN-----VTPPGDWSPSWVMWLELPQYLCNCKDVILRRNTA---- 646

  Fly   321 SGAGGGGCGLSSAPGAGSPNWSQGVEVHKQMNKTIIKLTENGTSINN-------TYIASTGGSSV 378
                 |..|....         .|.|.:.......||....||...|       ..:.:..|.|.
Mouse   647 -----GSLGFCIV---------GGYEEYSGNKPFFIKSIVEGTPAYNDGRIRCGDILLAVNGRST 697

  Fly   379 SG 380
            ||
Mouse   698 SG 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 22/59 (37%)
PDZ_signaling 197..276 CDD:238492 26/93 (28%)
Lnx1NP_001153049.1 mRING-HC-C3HC3D_LNX1 42..83 CDD:319693
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 185..220
NPXY motif 185..188
Interaction with MAGEB18. /evidence=ECO:0000250 186..244
PDZ_signaling 276..360 CDD:238492
PDZ_signaling 384..464 CDD:238492 22/58 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..500 7/26 (27%)
PDZ_signaling 506..589 CDD:238492 24/82 (29%)
PDZ_signaling 637..721 CDD:238492 17/81 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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