DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5921 and USH1C

DIOPT Version :9

Sequence 1:NP_727061.2 Gene:CG5921 / 31538 FlyBaseID:FBgn0029835 Length:886 Species:Drosophila melanogaster
Sequence 2:XP_016872564.1 Gene:USH1C / 10083 HGNCID:12597 Length:956 Species:Homo sapiens


Alignment Length:229 Identity:89/229 - (38%)
Similarity:128/229 - (55%) Gaps:15/229 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 SSRLRVLRLVRPHQRRLLVGGPERGSTYGFTVRGGREHGTGFFVSHVEHGGEAHLKGLRIGDQIL 122
            |.:|:.:||.|.|...|           |.:||||.|.|.|.|:||:..||:|...||::||:|:
Human    82 SRKLKEVRLDRLHPEGL-----------GLSVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIV 135

  Fly   123 RINGFRLDDAVHKEFIQLVAGQDRVTLKVRGVGMLPVRDLPEERLSWSVVK--LPSVSGTPSESS 185
            ||||:.:....|:|.|.|:..:..|::|||.:|::||:..|:|.|:|..|.  :....|......
Human   136 RINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPDEPLTWQYVDQFVSESGGVRGSLG 200

  Fly   186 FKGERRGASRDISVVLHVAPRTKLGLGICKGPEWKPGIFVQFTKDRSVAREAGLRPGDQILSVNS 250
            ..|.|....:.:.:.| |..| .||..|..||..|||||:...|..|::.|.||..||||:.||.
Human   201 SPGNRENKEKKVFISL-VGSR-GLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNG 263

  Fly   251 IDFSDVLFSEAVAVMKSSSKLDMVVRTAAGCDLF 284
            :|||::...|||.|:|||..|.:.:..|||.:||
Human   264 VDFSNLDHKEAVNVLKSSRSLTISIVAAAGRELF 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5921NP_727061.2 PDZ_signaling 82..152 CDD:238492 29/69 (42%)
PDZ_signaling 197..276 CDD:238492 35/78 (45%)
USH1CXP_016872564.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 62 1.000 Domainoid score I10387
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007864
OrthoInspector 1 1.000 - - oto91339
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR23116
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11064
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
98.900

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