DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5937 and GNL2

DIOPT Version :9

Sequence 1:NP_001096888.2 Gene:CG5937 / 31537 FlyBaseID:FBgn0029834 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_197462.1 Gene:GNL2 / 832081 AraportID:AT5G19610 Length:1375 Species:Arabidopsis thaliana


Alignment Length:1180 Identity:206/1180 - (17%)
Similarity:361/1180 - (30%) Gaps:495/1180 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IIKESTG-----------TKHNALRQTAQIAYDKLYRQHGIHRDPSHELRS-------------- 47
            ::::|||           |.|..:    ||.:.:|         |..|:|.              
plant   180 VVQQSTGRGDLLQRNGRYTMHELI----QIIFSRL---------PDFEVRGDEGGEDSESDTDEI 231

  Fly    48 ---------VCFTALQMALDTKRPKFITMGLNG--LHRVIKDERFYI------GLEPEDDSVWLP 95
                     .|...............:...|.|  :|...:|.:.:.      .:|...|::...
plant   232 DMSGGYGIRCCIDIFHFLCSLLNVVEVVENLEGTNVHTADEDVQIFALVLINSAIELSGDAIGQH 296

  Fly    96 SQLLRATNGILPTTSSEDTVVNVLR-------LFLAMACSPACTLN--------GRLLIE----- 140
            .:|||..        .:|...:::.       |.|:|.||  |.||        .||.:|     
plant   297 PKLLRMV--------QDDLFHHLIHYGASSSPLVLSMICS--CILNIYHFLRKFMRLQLEAFFSF 351

  Fly   141 ILSRCGECWEMGSRATKAASL-AAASQCLRTFC---AFLIEE-------------AEEVKK---- 184
            :|.|.       :..|....| ..|.:.|..||   ||::|.             .||..|    
plant   352 VLLRV-------TAFTGFLPLQEVALEGLINFCRQPAFIVEAYVNYDCDPMCRNIFEETGKVLCR 409

  Fly   185 -TAP-AGLMTQTQASAVYNEVIPVMQWLCSRLVEPNVNASP---NKKCENHSSL----------Y 234
             |.| :|.:|..|..|....||.:..      :..|::...   |::.:|:|::          |
plant   410 HTFPTSGPLTSIQIQAFEGLVILIHN------IADNMDREEDEGNEEDDNNSNVIKPSPVEIHEY 468

  Fly   235 LTECI-------------LTLSSALPRN--VHANPHF--------------------------TS 258
            :...|             :.:..|..|.  :.|| ||                          .|
plant   469 IPFWIDKPKEDFETWVDHIRVRKAQKRKLAIAAN-HFNRDEKKGLEYLKYNYLVSDPLDPMALAS 532

  Fly   259 FLWQKFCPTLAAA-----LGSPGRINLD--KKFTYKDALHMIENEARGFFTGPGLDGPQARCVYL 316
            |.  :|.|.|...     ||.|..::|.  :.||     |..|      |||..||     ....
plant   533 FF--RFTPGLDKTMIGDYLGDPDELHLSVLRSFT-----HTFE------FTGMNLD-----TALR 579

  Fly   317 TAIQLLRIAGAHGSLRPMLEALFHRMLLLPAPQNRTEPLRCVREIFKSPERLIDLAVILYVDKNT 381
            |.::..|:.|....:..|:||.                          .||..|           
plant   580 TFLESFRLPGESQKIERMIEAF--------------------------SERFYD----------- 607

  Fly   382 AQGCSDEMALFRLLVDAMEECAYGASGGGSATEASLQASVECMVALLDSLQVLC----------- 435
             |..||                                    :.|..|::.:||           
plant   608 -QQSSD------------------------------------IFASKDTVHILCYSLIMLNTDQH 635

  Fly   436 SGELTESMISDQIV---QVVNGRHDLLKD----------------ADYSGPLT------YQSMAR 475
            :.::...|..|:.:   :.:|..:||.|:                :.:|||:.      .:.|.|
plant   636 NPQVRRKMTEDEFIRNNRAINAGNDLPKEYLSELFQSIATNAFALSTHSGPVEMNPNRWIELMNR 700

  Fly   476 LPAPYRDAIVEFRQTV----FETSSG-----------SESEGEPQHE-QDAASNGSGDTE-GPED 523
            .......::.:|.:.:    |.|.:|           ...:.|..|| .||..:.:...: |.||
plant   701 TKTTQPFSLCQFDRRIGRDMFATIAGPSIAAVSAFFEHSDDDEVLHECVDAMISIARVAQYGLED 765

  Fly   524 --DDPSSS--------SDETSRVENRWPYSHLEAP---VMPIRTDSDNDRQHARDFARALR---Q 572
              |:..:|        :..|:..|..:.:||...|   .:.:.|       .|..|..::|   :
plant   766 ILDELIASFCKFTTLLNPYTTPEETLFAFSHDMKPRMATLAVFT-------LANTFGDSIRGGWR 823

  Fly   573 DLVPKLLRLRSCVELDEAMQEFASAVCQEN----------------------------------- 602
            ::|..||:||....|.:::.||  .:.:||                                   
plant   824 NIVDCLLKLRKLQLLPQSVIEF--EINEENGGSESDMNNVSSQDTKFNRRQGSSLMGRFSHFLAL 886

  Fly   603 -------SMNFSDFDYNLTAINADGIYLAIYSSLLLS----LQLMRAGFYEQVAQGMSHKDILVP 656
                   ::..|:|:.||..|....|......|.:|.    |.|.|:..|....:|         
plant   887 DNVEESVALGMSEFEQNLKVIKQCRIGQIFSKSSVLPDVAVLNLGRSLIYAAAGKG--------- 942

  Fly   657 MSEQQFVTSVQNTGVLVYLSSPWLCELYQSVTVCNV----------------------LEAMP-- 697
               |:|.|:::....:.:.   |  :|..::.:.||                      ...:|  
plant   943 ---QKFSTAIEEEETVKFC---W--DLIITIALSNVHRFNMFWPSYHEYLLNVANFPLFSPIPFV 999

  Fly   698 RQQLEGMGPRCALVDMLCDAGGLGATQMLSEWQRLQTANVKHKEEEQLHDKRREAAKKLCRRLLT 762
            .:.|.|:...|.                     ::..:|::....|:|..:......|:.:.::.
plant  1000 EKGLPGLFRVCI---------------------KILASNLQDHLPEELIFRSLTIMWKIDKEIIE 1043

  Fly   763 CCWDSMVIVLSSGLGDLQTSSASN-------KLVALSKRTLRVKAKA----------NKSN-GEA 809
            .|:|::...:|..:.|...:..:|       :|::|..|....|.:|          |.|: .::
plant  1044 TCYDTITEFVSKIIIDYSANLHTNIGWKSVLQLLSLCGRHPETKEQAVDALIGLMSFNASHLSQS 1108

  Fly   810 LYAMCLDGLHSAATLSNSLNLQHLAGKILNLLASNV--------------CQTSGPRISASQAMS 860
            .||.|:|...|...|.||...::|  |||:|:|.:|              ..:..|..:.|.:.|
plant  1109 SYAYCIDCAFSFVALRNSSVEKNL--KILDLMADSVTMLVKWYKTASTDTANSYSPASNTSSSSS 1171

  Fly   861 MDVVLTGGLN 870
            |:.....|:|
plant  1172 MEENNLRGVN 1181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5937NP_001096888.2 Sec7 451..692 CDD:294092 60/341 (18%)
DUF1981 1115..>1179 CDD:286414
GNL2NP_197462.1 PLN03076 <275..>828 CDD:215560 120/675 (18%)
Sec7 493..678 CDD:396096 45/277 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10663
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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