DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5937 and siz

DIOPT Version :9

Sequence 1:NP_001096888.2 Gene:CG5937 / 31537 FlyBaseID:FBgn0029834 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_730594.1 Gene:siz / 40327 FlyBaseID:FBgn0026179 Length:1325 Species:Drosophila melanogaster


Alignment Length:634 Identity:118/634 - (18%)
Similarity:180/634 - (28%) Gaps:253/634 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  1492 QQQSPSVQDHGCGYTQQYDSSSSSASEEQQKNGGGVG-GGGSNLIESPTKISGSATLALKQLLLV 1555
            :..||.....|.........|:.||......:||||| .||:.:.                    
  Fly   655 RSNSPHTWKRGTALNSSQQFSTHSADSAGAVSGGGVGVAGGAGVY-------------------- 699

  Fly  1556 LIECAAQSQEAIARISVS-----CLKHVILSTGMLFNESQWMIACSAIHRACTVTIAPLRQLSFA 1615
                |||.|.|:|..:.:     ...|.|.|                 |.:..         .:.
  Fly   700 ----AAQMQAAVAAATAAGGMPPADDHAISS-----------------HTSAA---------QYE 734

  Fly  1616 FHEKSNSFYGDCANVKVAARRDSSLEELARIYALAQQVFLSD----NQREPGQNQAPTPSASQCK 1676
            .||:..             .....|:..|....:||...:|:    .|...|.|           
  Fly   735 QHEQQQ-------------HEQQQLQAAAAAAGVAQNYKMSETIRKRQYRVGLN----------- 775

  Fly  1677 LSDDRSYSFLLYPLNNGFNSNLDNFVIR--IPFKNL-------VVGLLANQMLLQLVAKLLLSRL 1732
            |.:.:....:.|.:..||..|....|.|  |..|.|       .:|.|.||..:           
  Fly   776 LFNKKPEKGITYLIRRGFLENTPQGVARFLITRKGLSRQMIGEYLGNLQNQFNM----------- 829

  Fly  1733 KCVPQAVSTCIFDNYAASAASPSHDYDLDFRSKEILLRCVKQYLMSALEFDSRPG----LKFLMQ 1793
                 ||.:|.           :.:.||..|..::.||..:.|.       ..||    ::.||:
  Fly   830 -----AVLSCF-----------AMELDLSGRQVDVALRKFQAYF-------RMPGEAQKIERLME 871

  Fly  1794 KVSN--IEYAANLYKQMTSSWMIYYIALVDSHLN-DIVVYNLGPEDL----NFI-----LESC-- 1844
            ..|.  .|..|::..::.||..|:.:|.....|| |:...||.||..    :||     ::.|  
  Fly   872 IFSQRYCECNADIVGRLRSSDTIFVLAFAIIMLNTDLHTPNLKPERRMRVEDFIKNLRGIDDCHD 936

  Fly  1845 ----------------------------SRLNTTTVKKKENFV---RYLFCLQDAWNLVCELY-- 1876
                                        .::..|.|.||.|..   |.|.|       .|.||  
  Fly   937 IDKDMLMGIYDRVKSDEFKPGSDHVTQVMKVQATIVGKKPNLALPHRRLVC-------YCRLYEI 994

  Fly  1877 -----LSNSALHEIE-------------------SGSGKLRQKPP------QLLHHPQTKPMCIS 1911
                 .....:|:.|                   |.:...|...|      .||..| ..|.||.
  Fly   995 PDVNKKERPGVHQREVFLFNDLLVITKIFSKKKTSVTYTFRNSFPLCGTVVTLLDMP-NYPFCIQ 1058

  Fly  1912 LNGNGDAEMTDTGSGSGSGSSTSPSKC----------VQLQEEENVTMTTLISEFQPKCRSN--- 1963
            |:...|.::..|     ..:.....:|          .::.|.|::.:...: |.|...|:.   
  Fly  1059 LSQKVDGKILIT-----FNARNEHDRCKFAEDLKESISEMDEMESLRIEAEL-ERQKSARNRAPG 1117

  Fly  1964 -----------------PFDTNRQAKSSEAESISPEIEQQRASSILKDS 1995
                             |:....||...:|.: |.:..||...|.|.:|
  Fly  1118 NAENRDSGVADVEVCPCPYQQGSQASGEQAPN-SADNSQQLKRSALSNS 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5937NP_001096888.2 Sec7 451..692 CDD:294092
DUF1981 1115..>1179 CDD:286414
sizNP_730594.1 Sec7 766..954 CDD:279680 47/232 (20%)
PH_IQSEC 981..1108 CDD:270128 24/140 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45452081
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10663
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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