DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5937 and Arfgef1

DIOPT Version :9

Sequence 1:NP_001096888.2 Gene:CG5937 / 31537 FlyBaseID:FBgn0029834 Length:2051 Species:Drosophila melanogaster
Sequence 2:NP_001263985.1 Gene:Arfgef1 / 312915 RGDID:1560793 Length:1846 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5937NP_001096888.2 Sec7 451..692 CDD:294092
DUF1981 1115..>1179 CDD:286414
Arfgef1NP_001263985.1 DCB, DCB:DCB domain and DCB:HUS domain interaction. /evidence=ECO:0000250 2..224
PLN03076 15..1763 CDD:215560
DCB 29..210 CDD:292830
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 217..248
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..302
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 347..410
Sec7_N 416..570 CDD:289549
HUS, DCB:HUS domain interaction. /evidence=ECO:0000250 554..574
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 631..684
Sec7 695..879 CDD:279680
Nuclear localization signal (NLS). /evidence=ECO:0000250 708..712
DUF1981 1217..1297 CDD:286414
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1571..1600
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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