DRSC/TRiP Functional Genomics Resources

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Protein Alignment MCTS1 and AT1G71350

DIOPT Version :10

Sequence 1:NP_572288.1 Gene:MCTS1 / 31536 FlyBaseID:FBgn0029833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_177291.2 Gene:AT1G71350 / 843476 AraportID:AT1G71350 Length:597 Species:Arabidopsis thaliana


Alignment Length:194 Identity:48/194 - (24%)
Similarity:86/194 - (44%) Gaps:30/194 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKKFEEKDSISSIQQLKSSVQKGIRAKLLEAYPKL-ESHIDLILPKKDSYRIAKCHDHIELL-- 62
            ||||..|   ..|.|:|..:.:|.:|..:....|.| :..:|.|||.|....::|..:.:.:.  
plant     1 MFKKAVE---AKSHQRLSGADRKKLRRTVRNRLPLLTDELLDAILPPKVEITLSKFQNRVIVYSI 62

  Fly    63 ---------LNGAGDQVFFRHRDGPWMPTLRLLHKFPYFVTMQQVDKGAI-RFVLSGANVMCPGL 117
                     ::|.|.::|         ||:..|.:.|..:....:..|.: |:::.||::|.||:
plant    63 EGGCPMFFDIDGRGTEIF---------PTVFALWEAPEMLPSFMLKGGEVSRYIIGGADLMFPGI 118

  Fly   118 TSPGACMTPADKDTVVAIMAEGKEHALAVGLLTLSTQEILAKNKGI---GIETYHFLNDGLWKS 178
            ..|...........:.|:...|....:|||..|:|::|  |:..|:   .:...|:..|.||:|
plant   119 LIPPQGYPSFSAGEIWAVKVPGNLAPIAVGCTTMSSEE--ARKAGLRGKALRITHYYRDFLWES 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MCTS1NP_572288.1 MCT1_N 4..81 CDD:211422 18/88 (20%)
PUA_MCTS-1-like 81..176 CDD:409297 24/98 (24%)
AT1G71350NP_177291.2 eIF2D_N 9..81 CDD:211423 16/80 (20%)
PUA_eIF2d-like 92..174 CDD:409298 19/83 (23%)
eIF2D_C 509..592 CDD:211321
Blue background indicates that the domain is not in the aligned region.

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