DRSC/TRiP Functional Genomics Resources

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Protein Alignment MCTS1 and Eif2d

DIOPT Version :9

Sequence 1:NP_001245541.1 Gene:MCTS1 / 31536 FlyBaseID:FBgn0029833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001017489.1 Gene:Eif2d / 498225 RGDID:1561765 Length:570 Species:Rattus norvegicus


Alignment Length:189 Identity:51/189 - (26%)
Similarity:88/189 - (46%) Gaps:21/189 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MF-KKFEEKDSISSIQQLKSSVQKGIRAKLLEAYPKL-ESHIDLILPKKDSYRIAKCHDH----I 59
            || |.|..|.:.:    :|.|.::.:||.:..|:|.| ...:..::|.|:...:.|.:.|    :
  Rat     1 MFAKAFRVKSNTA----IKGSDRRKLRADVTVAFPTLGTDQVSELIPGKEELNVVKLYAHKGDAV 61

  Fly    60 ELLLNGAGDQVFFRHRDGPWMPTLRLLHK----FPYFVTMQQVDKGAIRFVLSGANVMCPGLTSP 120
            .:..:| |:.:.|......: ||:..|..    .|.|:|...|    :..::.||::|.||:..|
  Rat    62 TVYTSG-GNPILFELEKNLY-PTVYTLWSHPDLLPAFITWPLV----LEKLVGGADLMLPGVVVP 120

  Fly   121 GACMTPADKDTVVAIMAEGKEHALAVGLLTLSTQEILAKN-KGIGIETYHFLNDGLWKS 178
            ...:....:..:.||...|....:|||:..:||.::||.. ||.||...|...|.||:|
  Rat   121 PTGLPQVQQGDLCAIALVGNRAPVAVGVAAMSTAQMLASGLKGKGISVLHTYQDHLWRS 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MCTS1NP_001245541.1 MCT1_N 4..81 CDD:211422 16/81 (20%)
Tma20 18..177 CDD:224927 44/168 (26%)
PUA 69..173 CDD:294405 29/108 (27%)
Eif2dNP_001017489.1 eIF2D_N 6..81 CDD:211423 16/80 (20%)
Tma20 7..178 CDD:224927 45/180 (25%)
PUA 68..174 CDD:294405 30/110 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..200 1/2 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..243
eIF2D_C 477..561 CDD:211321
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2016
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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