DRSC/TRiP Functional Genomics Resources

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Protein Alignment MCTS1 and eif2d

DIOPT Version :9

Sequence 1:NP_001245541.1 Gene:MCTS1 / 31536 FlyBaseID:FBgn0029833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_957456.1 Gene:eif2d / 394137 ZFINID:ZDB-GENE-040426-1226 Length:590 Species:Danio rerio


Alignment Length:207 Identity:47/207 - (22%)
Similarity:82/207 - (39%) Gaps:54/207 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FEEKDSISSIQQLKSSVQKGIRAKLLEAYPKLE-SHIDLILPKKDSYRIAKCHDHIELLLNGAGD 68
            |.:...:.|...:|.|.::.:||.:..|:|.|. ..::.::|.|:...|.|.:.|       .||
Zfish     2 FAKAFRVKSNTVIKGSDRRKLRADISAAFPSLSVEELNELVPNKEELNIVKIYAH-------KGD 59

  Fly    69 QVFFRHRDGPWMPTLRLLHKFPYFVTMQQVDK-----------------------GAIRFVLSGA 110
            .|           ||.:|||.|.|.   |::|                       ..::.:..||
Zfish    60 AV-----------TLYVLHKNPIFF---QLEKQLFPTVYTLWRCPNMLPAFTTWPPVLQKLSGGA 110

  Fly   111 NVMCPGLTSPGACMTPADKDTVVAIMAEGKEHALAVGLLTLSTQEILAKN---KGIGIETYHFLN 172
            ::|.||:....:.:...::....|:........:|||...:|:.|:  :|   ||.|:...|...
Zfish   111 DLMLPGVVLSTSGLPEVNRGECCAVTLVMNRAPVAVGTAAMSSAEM--RNSGMKGKGVNVLHTYM 173

  Fly   173 DGLW----KSKP 180
            |.||    |:.|
Zfish   174 DQLWAFGDKTHP 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MCTS1NP_001245541.1 MCT1_N 4..81 CDD:211422 17/76 (22%)
Tma20 18..177 CDD:224927 43/189 (23%)
PUA 69..173 CDD:294405 26/129 (20%)
eif2dNP_957456.1 eIF2D_N 6..81 CDD:211423 25/95 (26%)
Tma20 19..179 CDD:224927 41/182 (23%)
PUA 64..170 CDD:294405 22/110 (20%)
eIF2D_C 496..580 CDD:211321
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2016
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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