DRSC/TRiP Functional Genomics Resources

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Protein Alignment MCTS1 and tma20

DIOPT Version :10

Sequence 1:NP_572288.1 Gene:MCTS1 / 31536 FlyBaseID:FBgn0029833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_596574.2 Gene:tma20 / 2540396 PomBaseID:SPBC31F10.12 Length:181 Species:Schizosaccharomyces pombe


Alignment Length:181 Identity:88/181 - (48%)
Similarity:120/181 - (66%) Gaps:6/181 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFKKFEEKDSISSIQQLKSSVQKGIRAKLLEAYPKLESHIDLILPKKDSYRIAKCHDHIEL-LLN 64
            |||:|..::.|.....:|||:|:||:|||::|||.|:..||.::|||......||.|.:.| .||
pombe     1 MFKRFNSREDIKGTTPIKSSIQRGIKAKLVQAYPNLKQVIDELIPKKSQLTQIKCEDRLFLYTLN 65

  Fly    65 GAGDQVFFRHRDGPWMPTLRLLHKFPYFVTMQQVDKGAIRFVLSGANVMCPGLTSPGACMTPAD- 128
              |:.:.|:|.|||.:|:|||:||.|...|..:||:|||:|:|||||:|.|||.|.|..: |.| 
pombe    66 --GEIILFQHFDGPIIPSLRLVHKCPDAFTQVRVDRGAIKFLLSGANIMIPGLVSKGGNL-PDDI 127

  Fly   129 -KDTVVAIMAEGKEHALAVGLLTLSTQEILAKNKGIGIETYHFLNDGLWKS 178
             ||..|.:.|||||...|:||..:|.:|:...|||||||..|:|.|.|||:
pombe   128 EKDQYVIVTAEGKEAPAAIGLTKMSAKEMKETNKGIGIENVHYLGDNLWKT 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MCTS1NP_572288.1 MCT1_N 4..81 CDD:211422 32/77 (42%)
PUA_MCTS-1-like 81..176 CDD:409297 50/96 (52%)
tma20NP_596574.2 MCT1_N 4..80 CDD:211422 32/77 (42%)
PUA_MCTS-1-like 80..176 CDD:409297 50/96 (52%)

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