DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5966 and Lipg

DIOPT Version :10

Sequence 1:NP_572286.1 Gene:CG5966 / 31532 FlyBaseID:FBgn0029831 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_001012759.1 Gene:Lipg / 291437 RGDID:1310740 Length:493 Species:Rattus norvegicus


Alignment Length:414 Identity:133/414 - (32%)
Similarity:204/414 - (49%) Gaps:53/414 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 FGVYGCFPINGPWNTV--TRSINVHPQKPSEI------EPHFTLHTRRALDQPKY----LDLNDP 99
            :.:|.|||. |...|:  ..|:.....||:.:      :|..|.:.|.:.| |::    |.|.|.
  Rat    11 WSLYCCFPA-GSLTTLRPQGSLRDEHHKPTGVPVTITTKPSVTFNIRTSKD-PEHEGCNLSLGDS 73

  Fly   100 ESVQGMGMNPKGKIFLLVHGYLESGEI-PWMWDMAKALLAHEPEGRASVVLIDWGGGASPPYVQA 163
            :.::..|.|...|.|.::||:..||.. .|:..:..||...|.|  |:||::||...|...|:.|
  Rat    74 KLLENCGFNMTAKTFFIIHGWTMSGMFESWLHKLVSALQTREKE--ANVVVVDWLPLAHQLYIDA 136

  Fly   164 VANIRLVGAITAHVVHMLYEELRLPNLDNVHIIGHSLGAHLSGYAGYHLQHDFGLKPARITGLDP 228
            |:|.|:||...|.:::.|.|:... :|.:||:||:|||||::||||..::...|    |||||||
  Rat   137 VSNTRVVGRRVAGMLNWLQEKGEF-SLGDVHLIGYSLGAHVAGYAGNFVKGTVG----RITGLDP 196

  Fly   229 AAPLFTDTDPIVRLDKTDAHFVDIVHTDANPLMKG-GLGINMRLGHVDFFPNGGFDNPGCNKKFQ 292
            |.|:|...|...||...||.|||::||  ..|..| .:||.|.:||:|.:||||...|||.  |.
  Rat   197 AGPMFEGVDINRRLSPDDADFVDVLHT--YTLSFGLSIGIRMPVGHIDIYPNGGDFQPGCG--FN 257

  Fly   293 DVVKKKTLFLTMQEFLGCNHIRSQQYFTESIGSQ-CPFLGITCDSFESFKDTKCTSCEEPGHTCL 356
            ||: ....:.|:.|.:.|.|.|:...|.:|:.:| .|.....|.....||...|.||.:  :.|.
  Rat   258 DVM-GSFAYGTISEMVKCEHERAVHLFVDSLVNQDKPSFAFQCTDPNRFKRGICLSCRK--NRCN 319

  Fly   357 RMGYHSQEDYQEQVDLGQLQQGDSPGVFYLWTGDSKPFCRLHYRITVRVSGHDES---------T 412
            .:||::::..:::           ....||.|....||...||::.|.:..:..|         |
  Rat   320 NIGYNAKKMRKKR-----------NSKMYLKTRAGMPFRVYHYQLKVHMFSYKNSGDIQPDLYIT 373

  Fly   413 LHGGEVGILSIQLHDALVKKAGKN 436
            |:|......::.|.  :|:|...|
  Rat   374 LYGSNADSQNLPLE--IVEKIELN 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5966NP_572286.1 Pancreat_lipase_like 76..390 CDD:238363 111/326 (34%)
LipgNP_001012759.1 lipo_lipase 53..488 CDD:132274 122/371 (33%)

Return to query results.
Submit another query.