DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6048 and st14b

DIOPT Version :9

Sequence 1:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_005161261.1 Gene:st14b / 777629 ZFINID:ZDB-GENE-061103-613 Length:864 Species:Danio rerio


Alignment Length:256 Identity:94/256 - (36%)
Similarity:124/256 - (48%) Gaps:27/256 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RIINGTEASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVLTAAHCFV--DQIIYDGTFV 107
            ||:.|.::..|....||.:.....       ||:||.|:|...|::|||||..  ||..|.    
Zfish   624 RIVGGKDSDEGEWPWQVSLHMKTQ-------GHVCGASVISNSWLVTAAHCVQDNDQFRYS---- 677

  Fly   108 PKEEFIVVMGNLDRYNRTNTLTFTIEERIMQLDKFDLSTYDKDIALLMLNGTVPTGHPTIRPIAL 172
            ..:::.|.:| |.....|:..|.....||:...::|.|:||.||||:.|:..| |.:..|.||.|
Zfish   678 QADQWEVYLG-LHNQGETSKSTQRSVLRIIPHPQYDHSSYDNDIALMELDSPV-TLNQNIWPICL 740

  Fly   173 --NRFAIPEGVVCQVTGWGNTEDG--YVSDILMTVDVPMISEEHCINDSDLGHLIQPGMICAGYL 233
              .....|.|....:||||...:|  .|..:|...:|.:|:...|....|.|  |.|.|||||.|
Zfish   741 PDPTHYFPAGKSVWITGWGKLREGSDAVPSVLQKAEVRIINSTVCSKLMDDG--ITPHMICAGVL 803

  Fly   234 EVGEKDACAGDSGGPLVC-----QSELAGVVSWGIQCALPRLPGVYTEVSYYYDWILQNMG 289
            . |..|||.||||||:..     :..||||||||..|.....|||||.|:.|..||.:..|
Zfish   804 S-GGVDACQGDSGGPMSSIEGNGRMFLAGVVSWGDGCGRRNRPGVYTRVTDYRSWIREITG 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 91/249 (37%)
st14bXP_005161261.1 SEA 92..180 CDD:279699
CUB 233..342 CDD:238001
CUB 351..457 CDD:238001
LDLa 465..497 CDD:238060
LDLa 499..533 CDD:238060
LDLa 536..570 CDD:238060
LDLa 578..613 CDD:238060
Tryp_SPc 624..858 CDD:214473 91/249 (37%)
Tryp_SPc 625..861 CDD:238113 92/251 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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