DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6048 and st14

DIOPT Version :10

Sequence 1:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_012821897.2 Gene:st14 / 448647 XenbaseID:XB-GENE-1008784 Length:845 Species:Xenopus tropicalis


Alignment Length:258 Identity:89/258 - (34%)
Similarity:126/258 - (48%) Gaps:30/258 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 RIINGTEASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVLTAAHCFVD--QIIYDGTFV 107
            ||:.|..|..|....||.:       :..|..|.||.||:.|..:::|||||.|  .:.|....:
 Frog   604 RIVGGVNADTGEFPWQVSL-------HVKGNKHTCGASLVSPTMLISAAHCFQDDQSMRYSDASL 661

  Fly   108 PKEEFIVVMGNLD--RYNRTNTLTFTIEERIMQLDKFDLSTYDKDIALLMLNGTVPTGHPT-IRP 169
                :...:|..|  :.|..:.:...| :|||....|:.:|||.||::|.|.  .|..:.. |:|
 Frog   662 ----WTAYLGLHDQAQLNSKDVVERKI-KRIMAHIGFNDNTYDNDISVLELE--KPVDYTDFIQP 719

  Fly   170 IAL--NRFAIPEGVVCQVTGWGN-TEDGYVSDILMTVDVPMISEEHCINDSDLGHLIQPGMICAG 231
            |.:  :....|.|....|||||. .|.|..:.||...::.:|::..|  :..|...:.|.|:|||
 Frog   720 ICIPESTHDFPVGKPIWVTGWGALKEGGGAAVILQKAEIRIINQTEC--NKLLDGQLTPRMLCAG 782

  Fly   232 YLEVGEKDACAGDSGGPLVC-----QSELAGVVSWGIQCALPRLPGVYTEVSYYYDWILQNMG 289
            ::. |..|||.|||||||..     :..|||:||||..||....|||||.|:...|||....|
 Frog   783 FVS-GGIDACQGDSGGPLSSVELNNKVYLAGIVSWGEGCARRNKPGVYTRVAMMRDWIRDKTG 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 86/251 (34%)
st14XP_012821897.2 SEA 76..167 CDD:460188
CUB 216..320 CDD:238001
CUB 328..432 CDD:238001
LDLa 442..474 CDD:238060
LDLa 476..511 CDD:238060
LDLa 513..547 CDD:238060
LDLa 554..587 CDD:197566
Tryp_SPc 604..839 CDD:214473 86/251 (34%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.