DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6048 and Tmprss13

DIOPT Version :9

Sequence 1:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001121000.1 Gene:Tmprss13 / 300682 RGDID:1310872 Length:539 Species:Rattus norvegicus


Alignment Length:284 Identity:97/284 - (34%)
Similarity:133/284 - (46%) Gaps:52/284 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TRTHLDTKAIRPRFNADPGRIINGTEASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVL 90
            :|.::..:.......|..|||:.|...|......||.:.        |||.|:|||:||...|||
  Rat   278 SRRYVSLQCAHCGLRAMTGRIVGGALTSESKWPWQVSLH--------FGTTHICGGTLIDAQWVL 334

  Fly    91 TAAHCFVDQIIYDGTFVPKEEFIVVMGNLDRYNRTNTL-----TFTIEERIMQ---LDKFDLSTY 147
            ||||||         ||.:|:   ::.....|..|:.|     ..:|.:.|:.   .|:.|    
  Rat   335 TAAHCF---------FVTREK---ILEGWKVYAGTSNLHQLPEAASISQIIINGNYTDEQD---- 383

  Fly   148 DKDIALLMLNGTVPTG---HPTIRPIALNRFAIPEGVVCQVTGWGNTE--DGYVSDILMTVDVPM 207
            |.||||:.|:..:...   ||...|:....|.:.|  .|.:||:|.|:  |...|..|..|.|.:
  Rat   384 DYDIALVRLSKPLTLSAHIHPACLPLHGQTFGLNE--TCWITGFGKTKETDEKTSPFLREVQVNL 446

  Fly   208 ISEEHC----INDSDLGHLIQPGMICAGYLEVGEKDACAGDSGGPLVCQSE----LAGVVSWGIQ 264
            |..:.|    :.||    .:.|.|:|||.|. |.:|:|.|||||||||:..    ||||.|||..
  Rat   447 IDFKKCNDYLVYDS----YLTPRMMCAGDLR-GGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTG 506

  Fly   265 CALPRLPGVYTEVSYYYDWILQNM 288
            |.....|||||:|:....||.:.|
  Rat   507 CGQKNKPGVYTKVTEVLPWIYRKM 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 91/259 (35%)
Tmprss13NP_001121000.1 WWbp <1..69 CDD:304964
SRCR_2 203..292 CDD:292133 1/13 (8%)
SRCR 216..288 CDD:278931 1/9 (11%)
Tryp_SPc 297..526 CDD:214473 91/259 (35%)
Tryp_SPc 298..526 CDD:238113 90/258 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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