DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6048 and St14

DIOPT Version :9

Sequence 1:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_036010597.1 Gene:St14 / 19143 MGIID:1338881 Length:875 Species:Mus musculus


Alignment Length:269 Identity:96/269 - (35%)
Similarity:134/269 - (49%) Gaps:34/269 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 NADPG--------RIINGTEASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVLTAAHCF 96
            |.|.|        |::.||.|..|....||.:       :..|.|||||.|||.|.|:::|||||
Mouse   621 NCDCGLRSFTKQARVVGGTNADEGEWPWQVSL-------HALGQGHLCGASLISPDWLVSAAHCF 678

  Fly    97 VDQIIYDGTFVPKE--EFIVVMGNLDRYNRTNTLTFTIE-ERIMQLDKFDLSTYDKDIALLMLNG 158
            .|    |..|...:  .:...:|.||:..|:.:....:: :||:....|:..|:|.|||||.|..
Mouse   679 QD----DKNFKYSDYTMWTAFLGLLDQSKRSASGVQELKLKRIITHPSFNDFTFDYDIALLELEK 739

  Fly   159 TVPTGHPTIRPIAL--NRFAIPEGVVCQVTGWGNTEDGYVSD-ILMTVDVPMISEEHCINDSDLG 220
            :|... ..:|||.|  .....|.|....|||||:|::|.... ||...::.:|::..|  :..:.
Mouse   740 SVEYS-TVVRPICLPDATHVFPAGKAIWVTGWGHTKEGGTGALILQKGEIRVINQTTC--EDLMP 801

  Fly   221 HLIQPGMICAGYLEVGEKDACAGDSGGPLVCQSE-----LAGVVSWGIQCALPRLPGVYTEVSYY 280
            ..|.|.|:|.|:|. |..|:|.|||||||....:     .|||||||..||....|||||.:...
Mouse   802 QQITPRMMCVGFLS-GGVDSCQGDSGGPLSSAEKDGRMFQAGVVSWGEGCAQRNKPGVYTRLPVV 865

  Fly   281 YDWILQNMG 289
            .|||.::.|
Mouse   866 RDWIKEHTG 874

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 90/249 (36%)
St14XP_036010597.1 SEA 108..198 CDD:396113
CUB 247..352 CDD:238001
CUB 360..464 CDD:238001
LDLa 474..506 CDD:238060
LDLa 512..543 CDD:238060
LDLa 545..579 CDD:238060