DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6048 and tmprss9

DIOPT Version :9

Sequence 1:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_002940084.3 Gene:tmprss9 / 100489279 XenbaseID:XB-GENE-993973 Length:1151 Species:Xenopus tropicalis


Alignment Length:264 Identity:91/264 - (34%)
Similarity:136/264 - (51%) Gaps:47/264 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 PGRIINGTEASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVLTAAHCF----VDQIIYD 103
            |.:|:.|.:|..|....|..:::        |:.|.||.::|...|:::|||||    |||:   
 Frog   544 PNKIVGGLDAVRGEIPWQASLKE--------GSRHFCGATIIGDRWLVSAAHCFNQTKVDQV--- 597

  Fly   104 GTFVPKEEFIVVMGNLDRYNRTNTLTFTIE-ERIMQLDKFDLSTYDKDIALLMLNGTVPTG---H 164
                     ...||: ...:..:|:...|. :|::|...|:..|.|.|:|:|.|..::...   .
 Frog   598 ---------TAHMGS-TALSGADTIAIKISLKRVIQHPHFNPLTLDFDVAVLELASSLTFNKYVQ 652

  Fly   165 PTIRPIALNRFAIPEGVVCQVTGWGNTEDGYVS--DILMTVDVPMISEEHC---INDSDLGHLIQ 224
            |...|.||.:|  |.|..|.::||||.::|.||  ::|....|.:|.::.|   .|.|     |.
 Frog   653 PVCLPSALQKF--PAGWKCMISGWGNIKEGNVSKPEVLQKASVGIIDQKICSVLYNFS-----IT 710

  Fly   225 PGMICAGYLEVGEKDACAGDSGGPLVCQSE-----LAGVVSWGIQCALPRLPGVYTEVSYYYDWI 284
            ..|||||:|: |:.|:|.|||||||.|:..     |||:|||||.||..:.||||:.|:...|||
 Frog   711 ERMICAGFLD-GKVDSCQGDSGGPLACEESPGIFFLAGIVSWGIGCAQAKKPGVYSRVTKLKDWI 774

  Fly   285 LQNM 288
            |..:
 Frog   775 LDTV 778

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 87/256 (34%)
tmprss9XP_002940084.3 SEA 60..156 CDD:396113
LDLa 186..221 CDD:238060
Tryp_SPc 234..463 CDD:214473
Tryp_SPc 547..774 CDD:238113 87/255 (34%)
LDLa 871..906 CDD:238060
Tryp_SPc 919..1145 CDD:238113
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D433637at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.