DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6048 and gzm3.3

DIOPT Version :9

Sequence 1:NP_572282.1 Gene:CG6048 / 31528 FlyBaseID:FBgn0029827 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001108166.1 Gene:gzm3.3 / 100001138 ZFINID:ZDB-GENE-070912-135 Length:257 Species:Danio rerio


Alignment Length:298 Identity:83/298 - (27%)
Similarity:127/298 - (42%) Gaps:59/298 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAVALLLIFLPSGLRGATTRTHLDTKAIRPRFNADPGRIINGTEASLGATRHQVGIRKALNDGYF 72
            :|:...|:.|...|.|                ..|.| ||.|..|...:..:...|:        
Zfish     1 MALCTFLLLLAISLAG----------------GMDSG-IIGGKVAKAHSRPYMASIQ-------- 40

  Fly    73 FGTGHLCGGSLIRPGWVLTAAHCFVDQIIYDGTFVPKEEFIVVMG--NLDRYNRTNTLTFTIEER 135
            ....|.|||.|||..:||||||| :::.:|.|    :....||:|  |:.::.:.       ::|
Zfish    41 INKHHTCGGMLIRDDYVLTAAHC-LNRGVYSG----RGHLEVVLGAHNISKHEQN-------QQR 93

  Fly   136 IMQLDKF---------DLSTYDKDIALLMLNGTVPTGHPTIRPIAL--NRFAIPEGVVCQVTGWG 189
            | |:.|:         ....|..||.||.|....... ..::.|:|  ....||..|.|.|.|||
Zfish    94 I-QVKKYIRHPMFQRNKEKDYSYDIMLLKLKNKAKIS-KFVKVISLPKKNGKIPANVKCSVAGWG 156

  Fly   190 NTED--GYVSDILMTVDVPMISEEHCINDSDLGHLIQPGMICAGYLEVGEKDACAGDSGGPLVCQ 252
            .|:.  ...||:|..|.:.:..:..| ......|.....|||:  :..|:...|.|||||||:|.
Zfish   157 LTKPKAELASDVLEEVTLKLQFDFEC-KTMWQQHFNTERMICS--VSDGKHAFCQGDSGGPLICN 218

  Fly   253 SELAGVVSWGIQ--CALPRLPGVYTEVSYYYDWILQNM 288
            ::...:||:..:  |...:.|.|:.::||:..||.:||
Zfish   219 TKPQAIVSYTFEGNCINKQYPQVFLKISYFLPWIKKNM 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6048NP_572282.1 Tryp_SPc 45..284 CDD:214473 72/255 (28%)
gzm3.3NP_001108166.1 Tryp_SPc 22..255 CDD:238113 74/257 (29%)
Tryp_SPc 22..252 CDD:214473 72/254 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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