DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6041 and tmprss4a

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_005157547.2 Gene:tmprss4a / 777630 ZFINID:ZDB-GENE-061103-631 Length:458 Species:Danio rerio


Alignment Length:260 Identity:88/260 - (33%)
Similarity:129/260 - (49%) Gaps:54/260 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EPKIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCYITDKKKYRTA 96
            :.:||||.||.|....:|||::        |...|.|||.:::...|.|||| |:..|.:|  ..
Zfish   221 QDRIVGGKDADIANWPWQVSLQ--------YSGQHTCGGSLVTPNWVVTAAH-CFNGDGRK--AL 274

  Fly    97 GEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTNDIALMFINGYIPWNWPTVTALALNS 161
            ..:.:|.|.|||:|    |...|::::|.:.||.|.....||                |.:.|.|
Zfish   275 SRWTVVSGITYLSS----TPSSYVKEIIVNSNYKPAESDFDI----------------TMIKLQS 319

  Fly   162 QLVATNTD---CL--------------ISGWGLLQQNGTFSSNTLQAATVPIVSYTTC---RISY 206
            .:..:.:.   ||              ::|||.:.:.|...|:.||.|.:.::....|   .:..
Zfish   320 PITLSESRRPVCLPPQNLGLKGGDGLVVTGWGHMAEKGGSLSSMLQKAQIQVIDSAQCSSPTVYG 384

  Fly   207 NSIPVSQVCAGYLSGGVDACQGDSGGP---MSCNGMLAGIVSYGAGCAAPGYPGVYTNVSYYYDW 268
            :||....:|||.::|||||||||||||   ::...:|.|:||:|.|||.||:|||||||....||
Zfish   385 SSITSRMICAGVMAGGVDACQGDSGGPLVHLADRWVLVGVVSWGVGCARPGFPGVYTNVDQMLDW 449

  Fly   269  268
            Zfish   450  449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 88/258 (34%)
tmprss4aXP_005157547.2 None

Return to query results.
Submit another query.