DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and Tmprss11d

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001028824.2 Gene:Tmprss11d / 64565 RGDID:620654 Length:417 Species:Rattus norvegicus


Alignment Length:255 Identity:84/255 - (32%)
Similarity:121/255 - (47%) Gaps:37/255 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 EPKIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCYITDKKKYRTA 96
            |.:|:||..|......:|||::|        .:.|.|||.:||...|.|||||.     :.|...
  Rat   183 EERIIGGTQAETGDWPWQVSLQL--------NNVHHCGGTLISNLWVLTAAHCF-----RSYSNP 234

  Fly    97 GEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTNDIALMFINGYIPWNWPTVT------ 155
            .::.    :|:..|:....|...::.::.|..||.....||||::.::..:     |.|      
  Rat   235 QQWT----ATFGVSTISPRLRVRVRAILAHAEYNSITRDNDIAVVQLDRPV-----TFTRNIHRV 290

  Fly   156 ALALNSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYTTCR--ISY-NSIPVSQVCAG 217
            .|...:|.:..::...::|||.|...|...:| ||...|.|||...|.  ..| .|:....:|||
  Rat   291 CLPAATQNIIPDSVAYVTGWGSLTYGGNTVTN-LQQGEVRIVSSEVCNEPAGYGGSVLPGMLCAG 354

  Fly   218 YLSGGVDACQGDSGGPMSCNG-----MLAGIVSYGAGCAAPGYPGVYTNVSYYYDWIVQK 272
            ..||.|||||||||||:....     .:.||||:|..|..|..|||||.|:.|.:||.|:
  Rat   355 VRSGAVDACQGDSGGPLVQEDTRRLWFVVGIVSWGYQCGLPNKPGVYTRVTAYRNWIRQQ 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 80/248 (32%)
Tmprss11dNP_001028824.2 SEA 48..140 CDD:460188
Tryp_SPc 186..414 CDD:238113 82/250 (33%)
Blue background indicates that the domain is not in the aligned region.

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