DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6041 and habp2

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001103843.2 Gene:habp2 / 553472 ZFINID:ZDB-GENE-030131-4721 Length:546 Species:Danio rerio


Alignment Length:277 Identity:90/277 - (32%)
Similarity:130/277 - (46%) Gaps:35/277 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LASGESLSSETAGK-----IEPKIVGGYDASIEQVSYQVSIRLTANDKKSYGSG----HLCGGVV 72
            |.:...|.....||     |.|:|.||..:..|...:|.|.::     :..||.    |.|||.:
Zfish   280 LTTPTKLEFSDCGKAAFSMIAPRIFGGRKSLPEAHPWQASFQV-----RPKGSNATFEHNCGGTL 339

  Fly    73 ISQRLVATAAHCCYITDKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNP--DALT 135
            |....:.|||||....|        |..:.:|...|...........::::|.||||..  |||.
Zfish   340 IDSCWILTAAHCIDEND--------EVRVELGGVNLEKDDPDKQFVEVEKIIVHENYTETFDALY 396

  Fly   136 NDIALMFI---NGYIPWNWPTVTALALNSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIV 197
            |||||:.:   ||.......:|.|..|.:.|....|.|.|||:|..:::...|:..|. |.|.::
Zfish   397 NDIALLKLKGRNGRCANESRSVRAACLPTDLFPEGTRCTISGYGATEKHHGVSTQLLD-AKVLLI 460

  Fly   198 SYTTC---RISYNSIPVSQVCAGYLSGGVDACQGDSGGPMSCN----GMLAGIVSYGAGCAAPGY 255
            |.:.|   .:..|.:..|.:||||:.|.:|:||||||||:.|.    ..:.|:||:|..|.....
Zfish   461 SQSRCMSRNVYGNRMDDSMMCAGYMQGKIDSCQGDSGGPLVCKKDNIHYIYGVVSWGDSCGKKNK 525

  Fly   256 PGVYTNVSYYYDWIVQK 272
            ||||..|:.:.|||.:|
Zfish   526 PGVYARVTKFIDWINEK 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 81/250 (32%)
habp2NP_001103843.2 EGF_CA 80..112 CDD:238011
EGF_CA 158..190 CDD:238011
KR 195..273 CDD:214527
Tryp_SPc 303..542 CDD:238113 83/252 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.