DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and tmprss2

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001008623.1 Gene:tmprss2 / 494080 ZFINID:ZDB-GENE-041212-48 Length:486 Species:Danio rerio


Alignment Length:294 Identity:100/294 - (34%)
Similarity:148/294 - (50%) Gaps:59/294 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILAIAL-FLGALASGESLS---SETAGKIEPKIVGGYDASIEQV-SYQVSIRLTANDKKSYGSGH 66
            ||:.:| |:.|..|..::|   ::.......:||||...:.:.| .:|||:.        |...|
Zfish   220 ILSPSLDFISACQSSTAVSLKCTDCGRSTGNRIVGGTTVTSKGVWPWQVSLH--------YSGRH 276

  Fly    67 LCGGVVISQRLVATAAHCCYITDKKKYRTAGEFVLVMGSTYLTSSTDRTLM-YYLQQLITHENYN 130
            ||||.:|:...:.|||||.:     ::...|.:.:..|  |||.|...:.. ..:.:::.|: :|
Zfish   277 LCGGSIITPYWILTAAHCVH-----QFSNPGGWTVYAG--YLTQSEMASASGNSVNRIVIHD-FN 333

  Fly   131 PDALTNDIALMFINGYIPWNWPTVTALALNSQL-----------VATNTDCLISGWGLLQQNGTF 184
            |:...||||||.:|          |||.:::.:           .....||.::|||.|...|: 
Zfish   334 PNTNENDIALMRLN----------TALTISTNIRPVCLPNKGMSFTAQQDCYVTGWGALFSGGS- 387

  Fly   185 SSNTLQAATVPIVSYTTCRISYNSIPV-------SQVCAGYLSGGVDACQGDSGGPMSCN----G 238
            ||.|||.|.:.::..|.|    ||.||       :.:|||.|:||||:||||||||:..|    .
Zfish   388 SSATLQEAKIQLIDSTIC----NSRPVYNGLITDTMICAGKLAGGVDSCQGDSGGPLVTNVRSLW 448

  Fly   239 MLAGIVSYGAGCAAPGYPGVYTNVSYYYDWIVQK 272
            .|.|..|:|.|||....||||.||:|:.|||.|:
Zfish   449 WLLGDTSWGDGCAVRNKPGVYGNVTYFLDWIYQQ 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 90/258 (35%)
tmprss2NP_001008623.1 DUF3824 <18..>77 CDD:372351
LDLa 132..168 CDD:238060
SRCR_2 173..248 CDD:470597 7/27 (26%)
Tryp_SPc 252..482 CDD:238113 92/260 (35%)
Blue background indicates that the domain is not in the aligned region.

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