DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and Tmprss11c

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001399454.1 Gene:Tmprss11c / 408213 RGDID:1302967 Length:431 Species:Rattus norvegicus


Alignment Length:273 Identity:93/273 - (34%)
Similarity:139/273 - (50%) Gaps:36/273 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ALASGESLSSETAGK--IEP---KIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQ 75
            |:...|.|.:...|:  |.|   |:.||.||...:..:|.|::        ..:.|.||..:||.
  Rat   176 AMPIAEDLLNTCCGRRTITPGGHKVAGGQDAEEGEWPWQASLQ--------QNNVHRCGATLISN 232

  Fly    76 RLVATAAHCCYI--TDKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTNDI 138
            ..:.|||| |::  .:.|.::.:..|:|          :.......::.::.||||:..|..|||
  Rat   233 SWLITAAH-CFVRSANPKDWKVSFGFLL----------SKPQAQRAVKSIVIHENYSYPAHNNDI 286

  Fly   139 ALMFINGYIPW-NWPTVTALALNSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYTTC 202
            |::.::..:.: |......|...:|....|:|.:::|||.|:.:|. |.|.||...|.|:...||
  Rat   287 AVVRLSSPVLYENNIRRACLPEATQKFPPNSDVVVTGWGTLKSDGD-SPNILQKGRVKIIDNKTC 350

  Fly   203 RI--SYNS-IPVSQVCAGYLSGGVDACQGDSGGPM---SCNGM--LAGIVSYGAGCAAPGYPGVY 259
            ..  :|.. |....:|||:|.|.|||||||||||:   ...|:  ||||||:|..||.|..||||
  Rat   351 NSGKAYGGVITPGMLCAGFLEGRVDACQGDSGGPLVSEDSKGIWFLAGIVSWGDECALPNKPGVY 415

  Fly   260 TNVSYYYDWIVQK 272
            |.|::|.|||..|
  Rat   416 TRVTHYRDWISSK 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 84/245 (34%)
Tmprss11cNP_001399454.1 SEA 62..161 CDD:460188
Tryp_SPc 200..428 CDD:238113 85/247 (34%)
Blue background indicates that the domain is not in the aligned region.

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