DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6041 and Tmprss4

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_038937788.1 Gene:Tmprss4 / 367074 RGDID:1305033 Length:478 Species:Rattus norvegicus


Alignment Length:269 Identity:86/269 - (31%)
Similarity:130/269 - (48%) Gaps:43/269 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LGALASGESLSSETAGKIEPKIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLV 78
            |..|..|:||.:       .::|||.:||.:...:||||:        |...|:|||.::....:
  Rat   232 LRCLDCGKSLKT-------TRVVGGVEASADSWPWQVSIQ--------YNKQHVCGGSILDHHWI 281

  Fly    79 ATAAHCCYITDKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDAL---TNDIAL 140
            .|||||.     :||.....:.:..||..|.:|....    :.::...|   |:.|   ..||||
  Rat   282 LTAAHCF-----RKYLDVSSWKVRAGSNKLGNSPSLP----VAKIFIAE---PNPLQPKEKDIAL 334

  Fly   141 MFINGYIPWNWP-TVTALAL---NSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYTT 201
            :.:.  :|..:. :|..:.|   :.:|:.|....:| |||..::||...|:||..|:|.::....
  Rat   335 VKLK--MPLTFSGSVRPICLPFSDEELIPTMPVWVI-GWGFTEENGGKMSDTLLQASVQVIDSAR 396

  Fly   202 CRIS---YNSIPVSQVCAGYLSGGVDACQGDSGGPMSCN---GMLAGIVSYGAGCAAPGYPGVYT 260
            |...   ...:....:|||...||.|.||||||||:..:   ..:.||||:|.||.:|..|||||
  Rat   397 CNAEDAYQGEVTAGMLCAGTPQGGKDTCQGDSGGPLMYHYDKWQVVGIVSWGYGCGSPSTPGVYT 461

  Fly   261 NVSYYYDWI 269
            .|:.|.|||
  Rat   462 KVTAYLDWI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 79/247 (32%)
Tmprss4XP_038937788.1 LDLa 99..133 CDD:238060
SRCR_2 149..238 CDD:470597 2/5 (40%)
Tryp_SPc 245..470 CDD:214473 79/247 (32%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.