DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and Corin

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:318 Identity:95/318 - (29%)
Similarity:137/318 - (43%) Gaps:77/318 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GKIEP--KIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCC---YIT 88
            |:.:|  :|:||..||.....:..:| |...:|..|     |.||:||.:.|.||:||.   .:.
  Fly  1096 GRHKPSRRIIGGTQASPGNWPFLAAI-LGGPEKIFY-----CAGVLISDQWVLTASHCVGNYSVI 1154

  Fly    89 DKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYN-PDALTNDIALMFINGYIPWNWP 152
            |.:      ::.:.:|.|...|.|.......::.:|.|..|| ..|..|||||          :.
  Fly  1155 DLE------DWTIQLGVTRRNSFTYSGQKVKVKAVIPHPQYNMAIAHDNDIAL----------FQ 1203

  Fly   153 TVTALALNSQLVAT------------NTDCLISGWGLLQQNGTFSS-----NTLQAATVPIVSYT 200
            ..|.:|.:..|:..            .|.|.:.|||..:.....|:     |.:|   |||::..
  Fly  1204 LATRVAFHEHLLPVCLPPPSVRNLHPGTLCTVIGWGKREDKDPKSTYEYIVNEVQ---VPIITRN 1265

  Fly   201 TCRISYNSIPVSQ--VCAGYLSGGVDACQGDSGGPMSC-------NGMLAGIVSYGAGCAAPGYP 256
            .|....:::.||:  ||||:..||.||||||||||:.|       ...:.||||:|..||.|..|
  Fly  1266 QCDEWLDNLTVSEGMVCAGFDDGGKDACQGDSGGPLLCPYPGEKNRWFVGGIVSWGIMCAHPRLP 1330

  Fly   257 GVYTNVSYYYDWIVQ---------KNSSLNYTIYHNGG-----------VRQGSSWSY 294
            |||.||..|..||.:         |...:|....|.||           :|:|:...|
  Fly  1331 GVYANVVQYVPWIQEQIAKHSRPIKEDRVNKYDLHPGGPDILSKIATDPMREGAPHHY 1388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 83/264 (31%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549
LDLa 911..942 CDD:238060
LDLa 945..979 CDD:238060
SR 980..>1034 CDD:214555
Tryp_SPc 1104..1346 CDD:238113 85/266 (32%)
Blue background indicates that the domain is not in the aligned region.

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