DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6041 and Send2

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_609708.2 Gene:Send2 / 34836 FlyBaseID:FBgn0264253 Length:239 Species:Drosophila melanogaster


Alignment Length:278 Identity:86/278 - (30%)
Similarity:125/278 - (44%) Gaps:71/278 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 IALFLGALASGESLSSETAGKI---EPKIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGV 71
            |..||..||    |:|.:||.:   |.:|:||....||:..:||||:   .|.|     |||||.
  Fly     3 IQSFLLLLA----LNSLSAGPVIRPEERIIGGQPIGIEEAPWQVSIQ---RDGK-----HLCGGS 55

  Fly    72 VISQRLVATAAHCCYITDKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTN 136
            :.|..::.|||||          ..|:...|...:.|.:|....:  .:..:.|||     .|.|
  Fly    56 IYSADIIITAAHC----------VQGQGYQVRAGSALKNSNGSVV--DVAAIRTHE-----GLGN 103

  Fly   137 DIALM-------FINGYIPWNWPTVTALALNSQLVATN----TDCLISGWGLLQQNGTFSSN--T 188
            |||::       |.|...|            ..|..||    :...:||||    :.::.|:  .
  Fly   104 DIAIVRLSKPLEFTNQVQP------------IPLAKTNPPPGSIAFVSGWG----SSSYYSHPID 152

  Fly   189 LQAATVPIVSYTTCRISYNSIPVSQVCAGYLSGGVDACQGDSGGPMSCNGMLAGIVSYGA-GCAA 252
            ||...:.|.....|.::    ..|::|||  |.|..||:||||||:..:..|.|:||.|. .|. 
  Fly   153 LQGVNLYIQWPYYCGLT----EPSRICAG--SFGRAACKGDSGGPLVFDQQLVGVVSGGTKDCT- 210

  Fly   253 PGYPGVYTNVSYYYDWIV 270
              |..:||:|.|:.:||:
  Fly   211 --YSSIYTSVPYFREWIL 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 74/248 (30%)
Send2NP_609708.2 Tryp_SPc 26..225 CDD:214473 74/248 (30%)

Return to query results.
Submit another query.