DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and l(2)k05911

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_723797.3 Gene:l(2)k05911 / 34731 FlyBaseID:FBgn0284244 Length:639 Species:Drosophila melanogaster


Alignment Length:284 Identity:80/284 - (28%)
Similarity:126/284 - (44%) Gaps:55/284 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 GALASGESLSSETAGKIEP---KIVGGYDASIEQVSYQVSIRLTANDKKSYGSG-HLCGGVVISQ 75
            |..:.|..|.......:.|   :||||.:||..:..:...:         :.|| ..|||.:|:.
  Fly   377 GTSSEGLPLQCGNKNPVTPDQERIVGGINASPHEFPWIAVL---------FKSGKQFCGGSLITN 432

  Fly    76 RLVATAAHCCYITDKKKYRTA------GEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDAL 134
            ..:.|||||  :.....:..|      |::.:  |:.:......|.    :::|:.|:.:....|
  Fly   433 SHILTAAHC--VARMTSWDVAALTAHLGDYNI--GTDFEVQHVSRR----IKRLVRHKGFEFSTL 489

  Fly   135 TNDIALMFINGYIPW----------NWPTVTALALNSQLVATNTDCLISGWGLLQQNGTFSSNTL 189
            .||:|::.::..:|:          ..|:..:.:.:.| |||     ::|||.|::||. ..:.|
  Fly   490 HNDVAILTLSEPVPFTREIQPICLPTSPSQQSRSYSGQ-VAT-----VAGWGSLRENGP-QPSIL 547

  Fly   190 QAATVPIVSYTTCRISY-----NSIPVSQVCAGYLSGGVDACQGDSGGPMSCNG----MLAGIVS 245
            |...:||.:...|...|     ..|..|.:|||  ....|:|.|||||||..|.    ...||||
  Fly   548 QKVDIPIWTNAECARKYGRAAPGGIIESMICAG--QAAKDSCSGDSGGPMVINDGGRYTQVGIVS 610

  Fly   246 YGAGCAAPGYPGVYTNVSYYYDWI 269
            :|.||....||||||.|:....||
  Fly   611 WGIGCGKGQYPGVYTRVTSLLPWI 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 74/260 (28%)
l(2)k05911NP_723797.3 CLIP 111..174 CDD:197829
PTZ00449 <198..>376 CDD:185628
Tryp_SPc 400..637 CDD:238113 76/261 (29%)
Blue background indicates that the domain is not in the aligned region.

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