DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and C1r

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001128027.1 Gene:C1r / 312705 RGDID:1309091 Length:707 Species:Rattus norvegicus


Alignment Length:257 Identity:69/257 - (26%)
Similarity:111/257 - (43%) Gaps:41/257 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCYITDKKKYRTAGE 98
            :|:||..|:.....:|....:       :|.|   ||.::..|.:.||||..|..:..|...   
  Rat   463 RIIGGQKANPGNFPWQAFTNI-------HGRG---GGALLGDRWILTAAHTIYPKEHNKENN--- 514

  Fly    99 FVLVMGSTYLTSSTDRTLM----YYLQQLITHENYNPDALTN---DIALMFINGYIPWNWPTVTA 156
             |.|....:|..:....:.    :.::::|.|.:|..|...|   ||||:.:...:... |.:..
  Rat   515 -VNVSKDVFLGHTNVEEIKKLGHHPVRRVIIHPDYRQDEPNNFEGDIALLELENSVTLG-PNLLP 577

  Fly   157 LALNSQLVATNTDCL--ISGWGLLQQNGTFSSNTLQAATVPIVSYTTCR---ISYNSIPV---SQ 213
            :.|.......:.|.:  :||:|:.:....|:   |:...:||.....|:   .:.||..|   :.
  Rat   578 ICLPDNETFYDKDLMGYVSGFGITEDKIAFN---LRFVRLPIADREACQRWLRTKNSNDVFSQNM 639

  Fly   214 VCAGYLSGGVDACQGDSGGPMSCNG------MLAGIVSYGAGCAAPGYPGVYTNVSYYYDWI 269
            .|:|..:...|||||||||..:...      :..||||:|.|| ..|| |.||.:..|.|||
  Rat   640 FCSGDPTLKHDACQGDSGGVFAVRDRSRDIWVATGIVSWGIGC-GEGY-GFYTKLLNYVDWI 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 67/255 (26%)
C1rNP_001128027.1 CUB 27..138 CDD:214483
FXa_inhibition 161..189 CDD:464251
CUB 195..302 CDD:395345
Sushi 309..371 CDD:459664
CCP 376..447 CDD:153056
Tryp_SPc 463..699 CDD:214473 67/255 (26%)
Blue background indicates that the domain is not in the aligned region.

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