DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and Tmprss3

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_038954650.1 Gene:Tmprss3 / 309665 RGDID:1310135 Length:454 Species:Rattus norvegicus


Alignment Length:253 Identity:91/253 - (35%)
Similarity:129/253 - (50%) Gaps:39/253 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 PKIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCY-ITDKKKYRTA 96
            |:||||..:|:.|..:|||::.     :.|   |||||.||:...:.|||||.| :...|.:...
  Rat   215 PRIVGGNVSSLTQWPWQVSLQF-----QGY---HLCGGSVITPLWIVTAAHCVYDLYHPKSWTVQ 271

  Fly    97 GEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTNDIALMFINGYIPWNWPTVTALALNS 161
            ...|.:|.|...:        :.::::|.|..|.|..|.||||||.::..:.:: .|:..:.|  
  Rat   272 VGLVSLMDSPVPS--------HLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFD-ETIQPICL-- 325

  Fly   162 QLVATNTD--------CLISGWGLLQQNGTFSSNTLQAATVPIVSYTTC--RISYNS-IPVSQVC 215
                .|::        |..||||..:.....:|..|..|.||::|...|  |..|.. |..|.:|
  Rat   326 ----PNSEENFPDGKLCWTSGWGATEDGAGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLC 386

  Fly   216 AGYLSGGVDACQGDSGGPMSCN----GMLAGIVSYGAGCAAPGYPGVYTNVSYYYDWI 269
            ||||.||||:||||||||:.|.    ..|.|..|:|.|||....|||||.::.:.|||
  Rat   387 AGYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWI 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 88/250 (35%)
Tmprss3XP_038954650.1 LDLa 74..107 CDD:238060
SRCR_2 112..211 CDD:464747
Tryp_SPc 216..444 CDD:214473 88/250 (35%)
Blue background indicates that the domain is not in the aligned region.

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