DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and Tpsg1

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001426649.1 Gene:Tpsg1 / 302990 RGDID:631355 Length:320 Species:Rattus norvegicus


Alignment Length:334 Identity:98/334 - (29%)
Similarity:142/334 - (42%) Gaps:77/334 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LAIALFLGAL----ASGESLSSETAGKIEP-------KIVGGYDASIEQVSYQVSIRLTANDKKS 61
            :|:..:.|.|    ..|.|..:..:|..:|       :||||:.|......:|.|:||.      
  Rat     1 MALGPYCGFLLLLAVPGISCEALQSGCGQPQVSHAGSRIVGGHAAQAGAWPWQASLRLQ------ 59

  Fly    62 YGSGHLCGGVVISQRLVATAAHC-CYITDKKKYRT-AGEFVLVMGSTYLTSSTDRTLMYYLQQLI 124
              ..|:|||.::|...|.||||| ....:...|.. .||..:.:...:.|          ::|:|
  Rat    60 --KVHVCGGSLLSPEWVLTAAHCFSGSVNSSDYEVHLGELTITLSPHFST----------VKQII 112

  Fly   125 THENY-NPDALTNDIALMFINGYIPWNWPTVTALALNSQ-----LVATNTD------CLISGWGL 177
            .:.:. .|...:.||||:.:          .|.:||:||     |...:.|      |.::|||.
  Rat   113 MYSSAPGPPGSSGDIALVQL----------ATPVALSSQVQPVCLPEASADFHPGMQCWVTGWGY 167

  Fly   178 LQQNGTFS-SNTLQAATVPIVSYTTCRISYNS-----IPVSQVCAGYLSGGVDACQGDSGGPMSC 236
            .|:..... ...||.|.|.:|...||..:|:|     |....:||.   |..||||.|||||:.|
  Rat   168 TQEGEPLKPPYNLQEAKVSVVDVETCSQAYSSSNGSLIQSDMLCAW---GPGDACQDDSGGPLVC 229

  Fly   237 N----GMLAGIVSYGAGCAAPGYPGVYTNVSYYYDWIVQKNSSLNYTIYHNGGVRQGSSWSYLGI 297
            .    ...||:||:|.||..|..||||..|:.|.:||.:      :.:...|...||.||     
  Rat   230 RVAGIWQQAGVVSWGEGCGRPDRPGVYARVTAYVNWIHR------HILEPGGSGMQGLSW----- 283

  Fly   298 LPLLVAFLL 306
            :|||....|
  Rat   284 IPLLAGLFL 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 80/258 (31%)
Tpsg1NP_001426649.1 None

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