DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and Tpsb2

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_062053.2 Gene:Tpsb2 / 29268 RGDID:3065 Length:274 Species:Rattus norvegicus


Alignment Length:295 Identity:94/295 - (31%)
Similarity:138/295 - (46%) Gaps:55/295 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKVWAILAIALFLGALASGESLSSETAGKIEPKIVGGYDASIEQVSYQVSIRLTANDKKSYGSG 65
            |.|:..:||::.....:.:......:..|     ||||.:||..:..:|||:|.    |.|:.. 
  Rat     1 MLKLLLLLALSPLASLVHAAPCPVKQRVG-----IVGGREASESKWPWQVSLRF----KFSFWM- 55

  Fly    66 HLCGGVVISQRLVATAAHC--CYITDKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLIT--- 125
            |.|||.:|..:.|.|||||  .:|...:.:|      :.:...||         ||..||:|   
  Rat    56 HFCGGSLIHPQWVLTAAHCVGLHIKSPELFR------VQLREQYL---------YYADQLLTVNR 105

  Fly   126 ---HENYNPDALTNDIALMFINGYIPWNWPT---VTALALNSQLVATNTDCLISGWGLLQQN-GT 183
               |.:|.......||||:.:..  |.|..|   .|:|...|:...:.|.|.::|||.:..: ..
  Rat   106 TVVHPHYYTVEDGADIALLELEN--PVNVSTHIHPTSLPPASETFPSGTSCWVTGWGDIDSDEPL 168

  Fly   184 FSSNTLQAATVPIVSYTTCRISYNS-------IPVSQ---VCAGYLSGGVDACQGDSGGPMSC-- 236
            .....|:...||||..:.|...|::       :|:.|   :|||....  |:||||||||:.|  
  Rat   169 LPPYPLKQVKVPIVENSLCDRKYHTGLYTGDDVPIVQDGMLCAGNTRS--DSCQGDSGGPLVCKV 231

  Fly   237 --NGMLAGIVSYGAGCAAPGYPGVYTNVSYYYDWI 269
              ..:.||:||:|.|||....||:||.|:||.|||
  Rat   232 KGTWLQAGVVSWGEGCAEANRPGIYTRVTYYLDWI 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 87/260 (33%)
Tpsb2NP_062053.2 Tryp_SPc 30..268 CDD:238113 89/261 (34%)

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