DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and Habp2

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001001505.2 Gene:Habp2 / 292126 RGDID:1302979 Length:558 Species:Rattus norvegicus


Alignment Length:267 Identity:85/267 - (31%)
Similarity:129/267 - (48%) Gaps:38/267 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ETAGKIE------PKIVGGYDASIE----QVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVAT 80
            ::.||.|      .:|.||:.::..    |||.|.|:.||.    |...||.|||.:|....|.|
  Rat   297 DSCGKTEMTEHAVKRIYGGFKSTAGKHPWQVSLQTSLPLTT----SMPQGHFCGGSLIHPCWVLT 357

  Fly    81 AAHCCYITDKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNP-DALT-NDIALMF- 142
            ||||..::.|       ...:|:|...|..:......:.:::::.:..||. |.:. |||||:. 
  Rat   358 AAHCTDMSTK-------HLKVVLGDQDLKKTESHEQTFRVEKILKYSQYNERDEIPHNDIALLKL 415

  Fly   143 --INGYIPWNWPTVTALALNSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYTTC--- 202
              :.|:.......|..:.|.|....:.|:|.|||||:.:...  .|..|..|.|.:::...|   
  Rat   416 KPVGGHCALESKYVKTVCLPSDPFPSGTECHISGWGVTETGE--GSRQLLDAKVKLIANALCNSR 478

  Fly   203 RISYNSIPVSQVCAGYL-SGGVDACQGDSGGPMSCNG----MLAGIVSYGAGCAAPGYPGVYTNV 262
            ::..::|..|.:|||.| ..|.|.||||||||::|..    .:.||||:|..|...  |||||.|
  Rat   479 QLYDHTIDDSMICAGNLQKPGSDTCQGDSGGPLTCEKDGTYYVYGIVSWGQECGKK--PGVYTQV 541

  Fly   263 SYYYDWI 269
            :.:.:||
  Rat   542 TKFLNWI 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 80/251 (32%)
Habp2NP_001001505.2 EGF_CA 71..107 CDD:238011
KR 191..275 CDD:238056
Tryp_SPc 312..551 CDD:238113 82/252 (33%)
Blue background indicates that the domain is not in the aligned region.

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