DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6041 and Hpn

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_038958886.1 Gene:Hpn / 29135 RGDID:61982 Length:539 Species:Rattus norvegicus


Alignment Length:276 Identity:96/276 - (34%)
Similarity:130/276 - (47%) Gaps:33/276 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCYITDKKKYRTAGE 98
            :||||.|:|:.:..:|||:|        |...|||||.::|...|.|||||.    .::.|....
  Rat   203 RIVGGQDSSLGRWPWQVSLR--------YDGTHLCGGSLLSGDWVLTAAHCF----PERNRVLSR 255

  Fly    99 FVLVMGSTYLTSSTDRTLMYYLQQLITHENYNP------DALTNDIALMFINGYIP-WNWPTVTA 156
            :.:..|:...||  ...:...:|.:|.|..|.|      |..:|||||:.::..:| ..:.....
  Rat   256 WRVFAGAVARTS--PHAVQLGVQAVIYHGGYLPFRDPTIDENSNDIALVHLSSSLPLTEYIQPVC 318

  Fly   157 LALNSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYTTCR---ISYNSIPVSQVCAGY 218
            |....|.:.....|.::|||..|..|. .:..||.|.|||:|...|.   ...|.|.....||||
  Rat   319 LPAAGQALVDGKVCTVTGWGNTQFYGQ-QAVVLQEARVPIISNEVCNSPDFYGNQIKPKMFCAGY 382

  Fly   219 LSGGVDACQGDSGGPMSCNG--------MLAGIVSYGAGCAAPGYPGVYTNVSYYYDWIVQKNSS 275
            ..||:||||||||||..|..        .|.||||:|.|||....|||||.|..:.:||.|....
  Rat   383 PEGGIDACQGDSGGPFVCEDRISGTSRWRLCGIVSWGTGCALARKPGVYTKVIDFREWIFQAIKP 447

  Fly   276 LNYTIYHNGGVRQGSS 291
            :..:|......|.|:|
  Rat   448 VALSIDSLRSYRHGNS 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 89/252 (35%)
HpnXP_038958886.1 Hepsin-SRCR 92..200 CDD:462736
Tryp_SPc 204..441 CDD:238113 89/251 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.