DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and Gzma

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:253 Identity:73/253 - (28%)
Similarity:112/253 - (44%) Gaps:44/253 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCYITDKKKYRTAGE 98
            :|:||.........|.|.::|..:.        :|.|.:|::..|.|||||  |..||.      
  Rat    28 RIIGGDTVVPHSRPYMVLLKLKPDS--------VCAGALIAKNWVLTAAHC--IPGKKS------ 76

  Fly    99 FVLVMGSTYLTSSTDRTLM-------YYLQQLITHENYNPDALTNDIALMFINGYIPWNWPTVTA 156
             .:::|:..:....::.::       |......|||        .|:.|:.:......| ..|..
  Rat    77 -EVILGAHSIKKEPEQQILSVKKAYPYPCFDKHTHE--------GDLQLLRLKKKATLN-KNVAI 131

  Fly   157 LAL--NSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYTTCRIS--YNSIPV---SQV 214
            |.|  ....|...|.|.::|||.. .|.:..|:||:...:.::....|...  ||..||   :.:
  Rat   132 LHLPKKGDDVKPGTRCHVAGWGRF-HNKSPPSDTLREVNITVIDRKICNDEKHYNFNPVIGLNMI 195

  Fly   215 CAGYLSGGVDACQGDSGGPMSCNGMLAGIVSYG--AGCAAPGYPGVYTNVS-YYYDWI 269
            |||.|.||.|:|.||||||:.|.|:..||.::|  ..|..|..||:||.:| .:.|||
  Rat   196 CAGNLRGGKDSCYGDSGGPLLCEGIFRGITAFGLEGTCGDPKGPGIYTLLSDKHLDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 71/251 (28%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 73/252 (29%)

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