DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6041 and klkb1

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_002934450.3 Gene:klkb1 / 100486524 XenbaseID:XB-GENE-985051 Length:629 Species:Xenopus tropicalis


Alignment Length:273 Identity:99/273 - (36%)
Similarity:145/273 - (53%) Gaps:33/273 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SGESLS----SETAGKIEP-----KIVGGYDASIEQVSYQVS--IRLTANDKKSYGSGHLCGGVV 72
            ||.||.    ....|..||     :||||.|:.:.:..:|||  :||||:.||     |.|||.:
 Frog   366 SGFSLRLCKIKSVKGCGEPIEHANRIVGGTDSVLGEWPWQVSMHLRLTASYKK-----HACGGSI 425

  Fly    73 ISQRLVATAAHCCYITDKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTND 137
            ||.:.:.|||||..:     :.....:::..|...|::.|..|.....:|:|.|.:|.......|
 Frog   426 ISNQWIVTAAHCFAM-----HPLPQMWIIYSGVVKLSNITQSTPFSETEQIIIHPHYTGAGNGTD 485

  Fly   138 IALMFINGYIPWNWPTVTALAL---NSQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSY 199
            |||:.:...|.:| ....|:.|   ....|..|: |.|:|||..:::|:. :|.||.|.||.:|.
 Frog   486 IALLKLKTPISFN-DHQKAICLPPREPTFVLPNS-CWITGWGFTEESGSL-ANILQKAEVPQIST 547

  Fly   200 TTCRISYNSIPVSQ--VCAGYLSGGVDACQGDSGGPMSC----NGMLAGIVSYGAGCAAPGYPGV 258
            ..|:.:|....:.:  :||||..|.:|:|:||||||::|    ...|.||.|:|.|||.||.|||
 Frog   548 EECQGNYEQTRIDKKILCAGYKRGKIDSCKGDSGGPLACVVDEIWYLTGITSWGEGCARPGKPGV 612

  Fly   259 YTNVSYYYDWIVQ 271
            ||.||.:.|||::
 Frog   613 YTRVSEFTDWIIE 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 90/245 (37%)
klkb1XP_002934450.3 APPLE 21..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 290..373 CDD:128519 4/6 (67%)
Tryp_SPc 391..626 CDD:238113 92/248 (37%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.