DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6041 and hgfac

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_002939269.3 Gene:hgfac / 100485696 XenbaseID:XB-GENE-940012 Length:595 Species:Xenopus tropicalis


Alignment Length:237 Identity:79/237 - (33%)
Similarity:110/237 - (46%) Gaps:44/237 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 YGSGHLCGGVVISQRLVATAAHCCYITD---KKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQL 123
            |...:.|.|.:|....|.:||||  ..|   |.|.|      :|:|..:...:||.|..:.:::.
 Frog   370 YIGNYFCAGSLIQPCWVVSAAHC--FADSPSKSKIR------VVLGQHFFNQTTDVTQTFEVERY 426

  Fly   124 ITHENYNP-DALTNDIALM---FINGYIPWNWPTVTALALNSQLVAT------------NTDCLI 172
            |.::.|:. ....:||.|:   .||          .|.|..:|.|.|            :..|.|
 Frog   427 IFYDKYSVFKRNEHDIVLIKLKRIN----------NACAKKTQFVQTICLPDVSAPFADDHHCQI 481

  Fly   173 SGWGLLQQNGTFSSNTLQAATVPIVSYTTC---RISYNSIPVSQVCAGYLSGGVDACQGDSGGPM 234
            :|||.:.::.|..:..||.|.||:|....|   .|....|..:..||||....:|:||||||||:
 Frog   482 AGWGRMHEDSTEYAQNLQEAIVPLVPDNKCSSPEIYGAEISENMFCAGYFDCTIDSCQGDSGGPL 546

  Fly   235 SCN----GMLAGIVSYGAGCAAPGYPGVYTNVSYYYDWIVQK 272
            :|.    ..|.||||:|.||.....|||||.||.|.|||.:|
 Frog   547 ACEKDKISYLWGIVSWGEGCGNHNKPGVYTKVSNYVDWINRK 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 76/232 (33%)
hgfacXP_002939269.3 FN2 52..98 CDD:238019
EGF_CA 109..145 CDD:238011
FN1 147..185 CDD:238018
KR 235..319 CDD:412161
Tryp_SPc 352..588 CDD:238113 78/235 (33%)
Blue background indicates that the domain is not in the aligned region.

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