DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6041 and LOC100331291

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_009295692.1 Gene:LOC100331291 / 100331291 -ID:- Length:932 Species:Danio rerio


Alignment Length:248 Identity:89/248 - (35%)
Similarity:137/248 - (55%) Gaps:19/248 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 KIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCYITDKKKYRTAGE 98
            |||||.||......:|||:::     :.|  ||:||..:::.|.:.:||||...:|..||..|..
Zfish   690 KIVGGTDAQAGSWPWQVSLQM-----ERY--GHVCGASLVASRWLVSAAHCFQDSDAIKYSDARS 747

  Fly    99 FVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTNDIALMFINGYIPWN---WPTVTALALN 160
            :...||...:.|.::......:::::.|..|:......||||:.::..:.:|   .|  ..:...
Zfish   748 WRAYMGMRVMNSVSNAAATRQIRRIVLHSQYDQFTSDYDIALLELSAPVFFNELVQP--VCVPAP 810

  Fly   161 SQLVATNTDCLISGWGLLQQNGTFSSNTLQAATVPIVSYTTCRISY-NSIPVSQVCAGYLSGGVD 224
            |.:..:.|.|.::|||:|.:.|..:: .||.|||.|:::.||...| :::....:|||.:.||||
Zfish   811 SHVFTSGTSCFVTGWGVLTEEGELAT-LLQEATVNIINHNTCNKMYDDAVTPRMLCAGNIQGGVD 874

  Fly   225 ACQGDSGGPMSC-----NGMLAGIVSYGAGCAAPGYPGVYTNVSYYYDWIVQK 272
            |||||||||:.|     ...||||||:|.|||....|||||.|..:.|||.|:
Zfish   875 ACQGDSGGPLVCLERGRRWFLAGIVSWGEGCARQNRPGVYTRVIKFTDWIHQQ 927

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 86/243 (35%)
LOC100331291XP_009295692.1 SEA 136..220 CDD:460188
CUB 315..415 CDD:238001
CUB 421..528 CDD:238001
LDLa 536..568 CDD:238060
LDLa 606..636 CDD:238060
LDLa 644..679 CDD:238060
Tryp_SPc 691..927 CDD:238113 87/245 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.