DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6041 and LOC100004411

DIOPT Version :10

Sequence 1:NP_572281.1 Gene:CG6041 / 31527 FlyBaseID:FBgn0029826 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_001343728.5 Gene:LOC100004411 / 100004411 -ID:- Length:494 Species:Danio rerio


Alignment Length:261 Identity:84/261 - (32%)
Similarity:126/261 - (48%) Gaps:32/261 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSETAGKIEPKIVGGYDASIEQVSYQVSIRLTANDKKSYGSGHLCGGVVISQRLVATAAHCCYIT 88
            |..|.|..:.:||||.........:||.:|    .:..||   .|||.:|:||.|.|||||  :.
Zfish   238 SDFTGGNEDTRIVGGQLQRQGGSPWQVLLR----REDEYG---FCGGSLINQRWVITAAHC--LQ 293

  Fly    89 DKKKYRTAGEFVLVMGSTYLTSSTDRTLMYYLQQLITHENYNPDALTNDIALMFINGYI---PWN 150
            ....:.|.|::      ..:....|...: .::::|.|.:|:.....:||||::::..:   |:.
Zfish   294 QTPHHITIGDY------DKMRPDKDEQKI-TVEKIIPHPHYHEYTFDSDIALLYLSSAVTLGPFA 351

  Fly   151 WPTVTALA-LNSQLVATNTDCLISGWG---LLQQNGTFSSNTLQAATVPIVSYTTCRISYNSIPV 211
            .|.....| |..:|:......|:||||   .||:    ||..|:...:|:|...:|..|...|..
Zfish   352 SPACLPDANLAERLMKPGEQGLVSGWGSTHYLQR----SSRFLRKVQLPVVEQKSCINSTEQIIT 412

  Fly   212 SQV-CAGYLSGGVDACQGDSGGPMSCN----GMLAGIVSYGAGCAAPGYPGVYTNVSYYYDWIVQ 271
            ..: |||:|...:|||.||||||...|    ..|.|:||:|..|||.|..||||.:..|..||.:
Zfish   413 DNMFCAGFLMEEMDACTGDSGGPFIVNYRGTWFLTGVVSWGERCAAQGKYGVYTRLGNYLSWIQE 477

  Fly   272 K 272
            :
Zfish   478 E 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6041NP_572281.1 Tryp_SPc 34..269 CDD:214473 79/246 (32%)
LOC100004411XP_001343728.5 None

Return to query results.
Submit another query.