DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3726 and zbtb20

DIOPT Version :9

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:XP_021331970.1 Gene:zbtb20 / 568779 ZFINID:ZDB-GENE-070112-1992 Length:707 Species:Danio rerio


Alignment Length:731 Identity:145/731 - (19%)
Similarity:224/731 - (30%) Gaps:286/731 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYHHSNLQTMFSQLLD-------RGCFCDVTLACEGQLIRAHRVVLCACSTFF-DAVLSNYASER 67
            :.||.||....:.:|:       ||.|||||:...|.::||||.||.|.|.|| |.:|..|:...
Zfish    24 RIHHINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKLLLGYSDIE 88

  Fly    68 DPIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWR----------- 121
            .|.:    |:...|:.||:|||.|.:.|..|....:|..|..|:||.:.:...|           
Zfish    89 IPSV----VSVQSVQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIVSQNVGISGS 149

  Fly   122 ------DDEDGPPPPMAAAEF-HSPPRSLAES-YAQDLILQHQQQQQQGPAAPPLNLHSSAALLE 178
                  ..:.|...|....|. .|.|.|.||| |.|   ..||....        :|:||.:.| 
Zfish   150 GSFSVVPGDSGQETPRGTPESGTSGPSSDAESGYMQ---TSHQSVYS--------SLYSSCSGL- 202

  Fly   179 RDRERERERDRERLSPGME-GVLGRMPVMTPLTGASGSAGVGSVSGGTSLE----GVAP------ 232
                            |:: |..|..      :..:|:|.:.:......|:    |..|      
Zfish   203 ----------------GLQNGTRGNR------SHYAGAAVIANYDSALPLQQKEAGQDPAWITRI 245

  Fly   233 ------VEHFLGPK-----RKRGRP----PLD--------DAYDVFNVRKLAQYAANL-----EP 269
                  :|.||...     ||:.||    |.|        |.::.:.:....:....|     ||
Zfish   246 HERSQQMERFLSTTETTHCRKQPRPVRLHPGDIHIKQEQGDEFNCYGIEDCREDGEPLECVESEP 310

  Fly   270 AQRAY-------LETARHFTEEPPLAAHAASMASPPAACPPKQRQRLR----------HQQQQQQ 317
            ...::       :.|.....|:|.|:..         .||.|.:|..|          ...:|.|
Zfish   311 KGESFDSGVSSSIGTETDSVEQPFLSGF---------NCPSKGQQGERGTPVQIEVNDSSPEQTQ 366

  Fly   318 QLLQSESSD---QEQPAAGQDWSNLEPNGSATPKLLSDG-------------------DANKQET 360
            ::::..|.:   ||....|...:||     ..|:::..|                   .:|.|..
Zfish   367 EIIEDSSGNGPTQESGEIGIHQANL-----TAPQVMPGGPYLRPGEPLTSNLRMPLTLTSNSQVM 426

  Fly   361 -EGGDESLPAVLTTASSSGTKKL-----EKIGERRE----------------------------- 390
             ..|:..||.:..|.|:|..|..     :.||.::.                             
Zfish   427 GTAGNTYLPTLFATQSASDNKPFLFSLPQSIGSQQPQFVAVPSPNMPPFPGGLSVPPGGSQQQGG 491

  Fly   391 ----RHG----------------KLRHARRLYEKSGEDEVDPPKEEP-------------DELPQ 422
                :||                |..:.:.::..:|        |:|             |.|.:
Zfish   492 APGGQHGEKKPYACTLCCKTFTAKQNYVKHMFVHTG--------EKPHQCSICWRSFSLKDYLIK 548

  Fly   423 PV--------------------EEIENEHLVANRAESPRPTVVIPASFACK-----------YEG 456
            .:                    :...|.|:..:|.|......:....|:.|           ...
Zfish   549 HMVTHTGVRAYQCSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHMALHSTGS 613

  Fly   457 GVTAAGGGSGSGTGSGSLGSSYLINEHGMLMAHEFAPNVASAAATAAVAVAAAAAAVANASAGNG 521
            ||:...|.||:|:..|.                      ||.....||....|.........|.|
Zfish   614 GVSGVSGVSGAGSAGGP----------------------ASIPVPMAVPEPGAGVVALAMPVGGG 656

  Fly   522 NGGQDVSGSGTGAAAD 537
            ..|..|..:|.|.||:
Zfish   657 VAGGGVGNAGVGVAAE 672

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB 21..118 CDD:279045 38/104 (37%)
BTB 32..121 CDD:197585 33/89 (37%)
HTH_psq 587..622 CDD:283007
zbtb20XP_021331970.1 BTB 41..143 CDD:306997 38/105 (36%)
C2H2 Zn finger 505..525 CDD:275368 1/19 (5%)
zf-C2H2 531..553 CDD:306579 2/21 (10%)
C2H2 Zn finger 533..553 CDD:275368 2/19 (11%)
zf-H2C2_2 545..570 CDD:316026 1/24 (4%)
zf-C2H2 559..581 CDD:306579 2/21 (10%)
C2H2 Zn finger 561..581 CDD:275368 2/19 (11%)
zf-H2C2_2 573..598 CDD:316026 5/24 (21%)
C2H2 Zn finger 589..609 CDD:275368 2/19 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.