DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3726 and mod(mdg4)

DIOPT Version :9

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_788698.1 Gene:mod(mdg4) / 49228 FlyBaseID:FBgn0002781 Length:610 Species:Drosophila melanogaster


Alignment Length:540 Identity:133/540 - (24%)
Similarity:210/540 - (38%) Gaps:169/540 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYASERD 68
            :|:.|.|...::||...|.:.|.||...||:||.|||:::|||:||..||.||..:.:...|...
  Fly     5 EQFSLCWNNFNTNLSAGFHESLCRGDLVDVSLAAEGQIVKAHRLVLSVCSPFFRKMFTQMPSNTH 69

  Fly    69 PIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPMAA 133
            .|:.:.:|:.:.:|.||:|||.||:||:..:||:.:.||:.|:||||.     |::..|.||..:
  Fly    70 AIVFLNNVSHSALKDLIQFMYCGEVNVKQDALPAFISTAESLQIKGLT-----DNDPAPQPPQES 129

  Fly   134 AEFHSPPRSLAESYAQDLILQHQQQQQ----------------------------QGPAAPPLNL 170
                |||.:......|.:..|..|:||                            |..|||    
  Fly   130 ----SPPPAAPHVQQQQIPAQRVQRQQPRASARYKIETVDDGLGDEKQSTTQIVIQTTAAP---- 186

  Fly   171 HSSAALLERDRERE--RERDRERLSPG------MEGVLGRMPVMTPLTGASGSAGVGSVSGGTSL 227
              .|.::::.:.::  ::...::|..|      :.....|....:.||.||.||||......||.
  Fly   187 --QATIVQQQQPQQAAQQIQSQQLQTGTTTTATLVSTNKRSAQRSSLTPASSSAGVKRSKTSTSA 249

  Fly   228 EGVAPVEHFLGPKRKRGRPPLDDAYDVFNVRKLAQYAANLEPAQRAYLETARHFTEEPPLAAHAA 292
            ..:               .|||...:..     |...|.|.| |:..::|               
  Fly   250 NVM---------------DPLDSTTETG-----ATTTAQLVP-QQITVQT--------------- 278

  Fly   293 SMASPPAACPPKQRQRLRHQQQQQQQLLQSESS----DQEQPAAGQ-DWSNLEPNGSATPKLLSD 352
            |:.|...|         :..||..||:.|.|:.    ..|.|...: |:|  |.:|.|.      
  Fly   279 SVVSAAEA---------KLHQQSPQQVRQEEAEYIDLPMELPTKSEPDYS--EDHGDAA------ 326

  Fly   353 GDAN----KQETEGG---DESL------PAVLTTASSSG---TKKLEKIGERRERHGKLRHARRL 401
            |||.    :.:|.|.   |:|.      ....|.|::||   |....|...:::...        
  Fly   327 GDAEGTYVEDDTYGDMRYDDSYFTENEDAGNQTAANTSGGGVTATTSKAVVKQQSQN-------- 383

  Fly   402 YEKS---------GEDEVD----------PPKEE-------PDELPQP--VEEIENEHLVANRAE 438
            |.:|         |..|..          ||::.       .|:.|:|  :|:::...|....:|
  Fly   384 YSESSFVDTSGDQGNTEAQAATSASATKIPPRKRGRPKTKVEDQTPKPKLLEKLQAATLNEEASE 448

  Fly   439 SPRPTVVIPASFACKYEGGV 458
                    ||.:|...:|||
  Fly   449 --------PAVYASTTKGGV 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB 21..118 CDD:279045 42/96 (44%)
BTB 32..121 CDD:197585 38/88 (43%)
HTH_psq 587..622 CDD:283007
mod(mdg4)NP_788698.1 BTB 22..118 CDD:279045 42/100 (42%)
BTB 33..118 CDD:197585 38/89 (43%)
FLYWCH 452..512 CDD:282369 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.010

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