DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3726 and lola

DIOPT Version :9

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster


Alignment Length:577 Identity:143/577 - (24%)
Similarity:221/577 - (38%) Gaps:187/577 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYASERD 68
            ||:||||..|.|.|.::|..||:.....|.|||.||:.::||:|||.|||.:| |.|.....::.
  Fly     5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYF-ATLLQEQYDKH 68

  Fly    69 PIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPMAA 133
            ||.|:|||.:.|::.::::||:||:|:....|.:|||.|:.|:||||::    :...|...|...
  Fly    69 PIFILKDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSD----NRTGGGVAPKPE 129

  Fly   134 AEFHSPPRSLAESYAQDLILQHQQQQQQGPAAPPLNLHSSAALLERDRERERERDRERLSPGMEG 198
            :..|.....|:.:|.                            ||:.:       |.||:.|   
  Fly   130 SSGHHRGGKLSGAYT----------------------------LEQTK-------RARLATG--- 156

  Fly   199 VLGRMPVMTPLTGASGSAGVGSVSGGTSLEGVAPVEHFLGPKRK----RGRPPLDDAYDVFNVRK 259
                        ||..::  |.|||  |.||.:      .|.|:    |.|...:||:|..|...
  Fly   157 ------------GAMDTS--GDVSG--SREGSS------SPSRRRRKVRRRSMENDAHDNSNSSV 199

  Fly   260 LAQYAANLEPAQR--AYLETARHFTEEPPLAAHAASMASPPAACPPKQRQRLRHQQQQQQQLLQS 322
            |...|:|....|:  |.|..:...|.:         ::|.|||....|.     ...||||.|.|
  Fly   200 LQAAASNQSILQQTGAGLAVSALVTTQ---------LSSGPAAGTSSQA-----SSTQQQQPLTS 250

  Fly   323 ESSDQEQPAAGQDWSNLEP-NGSATPKLLSDGDANKQETEGGDESLPAVLTTASSSGTKKLEKIG 386
            .:..::..:|....|...| :|::....:.....::|:.:          ||:.:..|:.::   
  Fly   251 TNVTKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQAQ----------TTSDAINTENVQ--- 302

  Fly   387 ERRERHGKLRHARRLYEKSGEDEVDPPKEEPDELPQPVEEIENEHLVANRAESPRPTVVIPASFA 451
                          ...:.|...|....|:.||                                
  Fly   303 --------------AQSQGGAQGVQGDDEDIDE-------------------------------- 321

  Fly   452 CKYEGGVTAAGGGSGSGTGSGSLGSSYLINEHGMLMAHEFAPNVASAAAT---AAVAVAAAAAAV 513
                   .:|.||..|.||                      ||.|||:|:   |.|.|...|:.|
  Fly   322 -------GSAVGGPNSATG----------------------PNPASASASAVHAGVVVKQLASVV 357

  Fly   514 ANASAGNGNGGQDVSGSGTGA------AADYP----DIKLEDYDAAELRLTNEELSQ 560
            ..:|:.:.:..:|.|.|..|:      .|:|.    |..:||....|..:|.|||.|
  Fly   358 DKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDLTLDEEDMTMEELDQ 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB 21..118 CDD:279045 42/96 (44%)
BTB 32..121 CDD:197585 39/88 (44%)
HTH_psq 587..622 CDD:283007
lolaNP_788308.3 BTB 22..117 CDD:279045 42/95 (44%)
BTB 33..117 CDD:197585 39/84 (46%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 63 1.000 Domainoid score I10232
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.010

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