DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3726 and bab2

DIOPT Version :9

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_523879.2 Gene:bab2 / 44254 FlyBaseID:FBgn0025525 Length:1067 Species:Drosophila melanogaster


Alignment Length:736 Identity:171/736 - (23%)
Similarity:262/736 - (35%) Gaps:257/736 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYASERD 68
            ||:||||..:.|||..:|.:||....|.||||:|||..|:||::||.|||.:|.|:..:...:. 
  Fly   196 QQFCLRWNNYQSNLTNVFDELLQSESFVDVTLSCEGHSIKAHKMVLSACSPYFQALFYDNPCQH- 259

  Fly    69 PIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPP-PMA 132
            |||||:||:::::|.|:||||||||||....:..|||.|:.|||:|||||:....|.|... ||:
  Fly   260 PIIIMRDVSWSDLKALVEFMYKGEINVCQDQINPLLKVAETLKIRGLAEVSAGRGEGGASALPMS 324

  Fly   133 AAEFHSPPRSLAESYAQDLILQHQQQQQQGPAAPPLNLHSSAALLERDRERERERDRERLSPGME 197
            |.:.......||.:.|   ||     ||.|.|.|               :.|.:..|.||.|  |
  Fly   325 AFDDEDEEEELASATA---IL-----QQDGDADP---------------DEEMKAKRPRLLP--E 364

  Fly   198 GVLGRMPVMTPLTGASGSAGVGSVSGGTSLEGVAPVEHFLGPKRKRGRPPLDDAYDVFNVRKLAQ 262
            |||                                                              
  Fly   365 GVL-------------------------------------------------------------- 367

  Fly   263 YAANLEPAQRAYLETARHFTEEPPLAAHAASMASPPAACPPKQRQRLRHQQQQQQQLLQSESSDQ 327
               :|...||.......:.|..|.|....:.::...::..|        .|.|.|.|..:.|:..
  Fly   368 ---DLNQRQRKRSRDGSYATPSPSLQGGESEISERGSSGTP--------GQSQSQPLAMTTSTIV 421

  Fly   328 EQPAAGQDWSNLEPNGSATPKLLSDGDANKQETEGGDESLPAVLTTASSSGTKKLEKIGERRERH 392
            ..|.|..:...||...||     .:..||::::       ||...|..|:|..            
  Fly   422 RNPFASPNPQTLEGRNSA-----MNAVANQRKS-------PAPTATGHSNGNS------------ 462

  Fly   393 GKLRHARRLYEKSGEDEVDPPKEEPDELPQPVEEIENEHLVANRAESPRPTVVIPASFACKYEGG 457
            |...|:             ||                ..:....|..|....::|...:.     
  Fly   463 GAAMHS-------------PP----------------GGVAVQSALPPHMAAIVPPPPSA----- 493

  Fly   458 VTAAGGGSGSGTGSGSLGSSYLINEHGMLMA--HEFAPNVASAAATAAVAVAAAAAAVANASAGN 520
                                  ::.|...:|  |:.|.:.|.|:|.||.|..|.||....|.:|:
  Fly   494 ----------------------MHHHAQQLAAQHQLAHSHAMASALAAAAAGAGAAGAGGAGSGS 536

  Fly   521 GN------GGQDVSGSGTGAA--ADYPDIKLEDYDAAELRLTNEE-------------------- 557
            |:      ||..|:|||.|||  :.:.|::::. :.||: :..||                    
  Fly   537 GSGASAPTGGTGVAGSGAGAAVGSHHDDMEIKP-EIAEM-IREEERAKMIESGGHGGWMGAAAAA 599

  Fly   558 ---------------LSQW--------QDVIKMDDYLAKGRRPQFWEEPFTKRVLDAIKNKRLEM 599
                           .|.|        |::::...:..:|....:..|...:.:...:| :.|.:
  Fly   600 TGAASVAADSYQYQLQSMWQKCWNTNQQNLVQQLRFRERGPLKSWRPEAMAEAIFSVLK-EGLSL 663

  Fly   600 KKAARILGVSYGTLYGRYREVYGCLKHPYSGTAFRNSGSTSTSQMGVQPRFDLGFRNGGVLPAQL 664
            .:|||...:.|.|..     :|....|...|.:............|...|..|     |:.|.:|
  Fly   664 SQAARKFDIPYPTFV-----LYANRVHNMLGPSLDGGADPRPKARGRPQRILL-----GMWPEEL 718

  Fly   665 -----------ELGKLKKDLS 674
                       :..::|:|:|
  Fly   719 IRSVIKAVVFRDYREIKEDMS 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB 21..118 CDD:279045 50/96 (52%)
BTB 32..121 CDD:197585 48/88 (55%)
HTH_psq 587..622 CDD:283007 7/34 (21%)
bab2NP_523879.2 BTB 213..309 CDD:279045 50/96 (52%)
BTB 224..309 CDD:197585 46/85 (54%)
HTH_psq 645..690 CDD:283007 10/50 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447062
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 73 1.000 Inparanoid score I5272
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
66.080

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