DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3726 and CG6118

DIOPT Version :10

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_001097806.1 Gene:CG6118 / 41884 FlyBaseID:FBgn0038339 Length:967 Species:Drosophila melanogaster


Alignment Length:560 Identity:121/560 - (21%)
Similarity:192/560 - (34%) Gaps:155/560 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAV-LSNYASERD 68
            ||.|.|...|.|:...|..|.......|||:|..|::.:||::||..||.:|..: |.|.:|.  
  Fly   392 QYLLSWNNFHGNMCRGFHSLQKDEKMVDVTIAAGGKIFKAHKLVLSVCSPYFQQIFLENPSSH-- 454

  Fly    69 PIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPMAA 133
            ||::|.||..:.:..|::|||.|::||::..||..||.|:.:|||||......|.:        |
  Fly   455 PILLMADVEASHMAGLLDFMYSGQVNVKYEDLPVFLKVAEAMKIKGLHTEKNLDSD--------A 511

  Fly   134 AEFHSPPRSLAE-------SYAQDLILQH------QQQQQQGPAAPPLN---------------- 169
            ::..||..|...       :::.::...|      ....||...:|.||                
  Fly   512 SDISSPHESDGTECRYERGTHSVNITSGHAAGYGGAPSSQQSSPSPSLNGPNRCPTPLSSGGSGN 576

  Fly   170 ---------LHSSAALLERDRERERERDRERLSPGMEGVLGRMPVMTPLTGA-SGSAGVGSVSGG 224
                     :.|.|.|.|...:.....:....|......||.......||.| |.|..:...:..
  Fly   577 PNYAGFREHIKSKATLAETFMKNLNRNNNNNNSSNNYNHLGGSNGSLNLTEADSNSFAILQANSK 641

  Fly   225 TSLEGVAPVEHFL--------------GPKR----KRGRPPLDDAY-DVFNVRKLAQYAANLEPA 270
            ..|:.......:|              |.||    :|.|.|..:.: |..|        .|...|
  Fly   642 KMLDSARKQHKYLAKRKILMHYNTELGGEKRLKEMERDRYPSAEQHDDALN--------NNHSHA 698

  Fly   271 QRAYLETARHFTEEPPLAAHAASMASPPAACPPKQRQRLRHQQQQQQQLLQSESSDQEQPAAGQD 335
            |...:|         |:.........||:.    .....:.:..:...|..:.:::|.|      
  Fly   699 QDNIME---------PIITTIVPQTPPPST----HNNNFKIRLVESHHLTNNSNNNQNQ------ 744

  Fly   336 WSNLEPNGSATPKLLSDGDANKQE---------TEGGDESLPAVLTTASSSGTKKLEKIGERRER 391
             |:...|.|::|:   ..|.|..|         ...|..:..|..|.|:.:...:|.|    ||.
  Fly   745 -SSNNNNSSSSPQ---SNDCNNDEEALNLVQIPNANGSRNREATPTCATPTPDIQLIK----REV 801

  Fly   392 HGKLRHARRLYEKSGEDEVDPPKEEPDELPQPVEEIENEHLVANRAESPRPTVVIPASFACKYE- 455
            ..:|..|..|...:|.|         ||:                         ..|.|..||: 
  Fly   802 KTELSPAENLSNNNGHD---------DEM-------------------------AGAGFDRKYDD 832

  Fly   456 ----GGV---TAAGGGSGSGTGSGSLGSSYLINEHGMLMA 488
                .|:   |.:...:....|..:.|.:..:.:|.:|.|
  Fly   833 NNNNSGLDMETDSNNNNSKPGGDNNNGLALALGKHKLLSA 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB_POZ_BAB-like 30..114 CDD:349624 34/84 (40%)
HTH_psq 587..622 CDD:283007
CG6118NP_001097806.1 Myb_DNA-bind_4 20..97 CDD:463994
BTB_POZ_BAB-like 418..500 CDD:349624 34/83 (41%)
Blue background indicates that the domain is not in the aligned region.

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