DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3726 and bab1

DIOPT Version :9

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_728565.1 Gene:bab1 / 38116 FlyBaseID:FBgn0004870 Length:977 Species:Drosophila melanogaster


Alignment Length:675 Identity:171/675 - (25%)
Similarity:249/675 - (36%) Gaps:234/675 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYASERD 68
            ||:||||..:.:||.|:|.|||...||.||||||:|:.::||::||.|||.:|..:|:....:. 
  Fly   100 QQFCLRWNNYQTNLTTIFDQLLQNECFVDVTLACDGRSMKAHKMVLSACSPYFQTLLAETPCQH- 163

  Fly    69 PIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPMAA 133
            ||:||:||.::::|.::||||:|||||....:..||:.|:.||::|||:||   ..:......||
  Fly   164 PIVIMRDVNWSDLKAIVEFMYRGEINVSQDQIGPLLRIAEMLKVRGLADVT---HMEAATAAAAA 225

  Fly   134 AEFHSPPRSLAES------------YAQDLI--LQHQQ-----------------QQQQG----- 162
            |.....|.|..||            .|::|:  :|.::                 ::|||     
  Fly   226 ASSERMPSSPKESTSTSRTEHDREREAEELLAFMQPEKKLRTSDWDPAELRLSPLERQQGRNVRK 290

  Fly   163 -----------PAAPPLNLHSSAALLER----DRERERERDRERLSPGMEGVLGRMPVMTPLTGA 212
                       |.|||..| ||....||    .:||||:||              ..:|||    
  Fly   291 RRWPSADTIFNPPAPPSPL-SSLIAAERMELEQKERERQRD--------------CSLMTP---- 336

  Fly   213 SGSAGVGSVSGGTSLEGVAPVEHFLGPKRKRGRPPLDDAYDVFNVRKLAQYAANLEPAQRAYLET 277
                                     .||     ||:.....|...|:               |||
  Fly   337 -------------------------PPK-----PPMSSGSTVGATRR---------------LET 356

  Fly   278 ARHFTEEPPLAAHAASMASPPAACPPKQRQRLRHQQQQQQQLLQSESSDQEQPAAGQDWSNLEPN 342
                      |.||..|.||.|...|..|....|.|..|||..|.:.   :.|..    ..|.|:
  Fly   357 ----------AIHALDMPSPAATPGPLSRSSRPHSQSPQQQQAQQQG---QLPLP----LPLHPH 404

  Fly   343 GSATP---KLLSDGDANKQETEGGDESLPAVLTTASSSGTKKLEKIGERRERHGKLRHARRLYEK 404
            ..|:|   ...:.|.|:...:..||...| :...|:.:..::|..:|                  
  Fly   405 HHASPAPHPSQTAGSAHHPASPAGDSRFP-LGPAAAMAAARELSGLG------------------ 450

  Fly   405 SGEDEVDPPKEEPDELPQPVEEIENEHLVANRAESPRPTVVIPASFACKYEGGVTAAGGGSGSGT 469
                  ..|..|| .||.|...                           :.||....|||.|.| 
  Fly   451 ------PGPSAEP-RLPPPPPH---------------------------HHGGGGVGGGGVGGG- 480

  Fly   470 GSGSLGSSYLINEHGMLMAH--EFAPNVASAAATAAVAVAAAAAAVANASAGNGNGGQDVSGSGT 532
            |:|.:||.     .|..:|.  |..|.:|.     .:.....|..:.|:.|..|       .:|:
  Fly   481 GAGGVGSG-----GGSSLADDLEIKPGIAE-----MIREEERAKMMENSHAWMG-------ATGS 528

  Fly   533 GAAADYPDIKLEDYDAAELRLTNEELSQWQDVIKMDDYLA-----KGRRP-QFWEEPFTKRVLDA 591
            ..|||....:|:              |.||.....:..|.     :.|.| :.|........:.:
  Fly   529 TLAADSYQYQLQ--------------SMWQKCWNTNQNLMHHMRFRERGPLKSWRPETMAEAIFS 579

  Fly   592 IKNKRLEMKKAARILGVSYGT--LY 614
            :..:.|.:.:|||...:.|.|  ||
  Fly   580 VLKEGLSLSQAARKYDIPYPTFVLY 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB 21..118 CDD:279045 46/96 (48%)
BTB 32..121 CDD:197585 42/88 (48%)
HTH_psq 587..622 CDD:283007 8/30 (27%)
bab1NP_728565.1 BTB 117..216 CDD:279045 48/102 (47%)
BTB 128..213 CDD:197585 40/85 (47%)
HTH_psq 569..614 CDD:283007 8/36 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447072
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.030

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