DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3726 and lov

DIOPT Version :10

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_611994.3 Gene:lov / 38007 FlyBaseID:FBgn0266129 Length:1143 Species:Drosophila melanogaster


Alignment Length:900 Identity:186/900 - (20%)
Similarity:293/900 - (32%) Gaps:317/900 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PQ-QYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLACEGQLIRAHRVVLCACSTFFDAVLSNYASE 66
            || .|.|||..|.:::...|..||......||||.|....||||::||.|||.||..|.:.... 
  Fly   111 PQDHYSLRWNNHQNHILRAFDALLKTKTLVDVTLVCAETSIRAHKMVLSACSPFFQRVFAETPC- 174

  Fly    67 RDPIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPM 131
            :.|:|::||.....|:.:::|||:|||:|....|.:|::..:.|:::||.|.:  ..|..|.|..
  Fly   175 KHPVIVLKDFRGWVVQAIVDFMYRGEISVPQQRLQTLIQAGESLQVRGLVESS--VPEHTPTPAA 237

  Fly   132 AAAEFHSPPRSLAESYAQDLILQHQQQQQQGPAAPPL-----NLHSSAALLERDRERERERDRER 191
            :..:|.....|:..|..:|......:..:.|....|.     |..|:.|.|...|:||:|.||: 
  Fly   238 SPDDFGMLDTSMLSSTFEDECPTMVRPSKGGKLLMPSARLFGNASSAIAALGLRRKREQESDRD- 301

  Fly   192 LSPGMEGVLGRMPVMTPLTGASGSAGVGSVSGGTSLEGVAPVEHFLGPKRKRGRPPL---DDAYD 253
                                         :.....|.|.:|:     |:||:.||..   |..:|
  Fly   302 -----------------------------LESDQELGGSSPM-----PRRKQARPRRRSGDVPHD 332

  Fly   254 VFNVRKLAQYAANLEPA-QRAYLETARHFTEEPP----LAAHAASMASPPAAC---PPKQRQRLR 310
             |.:.|..  |.:|:.. :...||.|....||.|    ....|..::|.||..   ..|:::.::
  Fly   333 -FTLNKTD--AESLQTVIKHELLERAERDQEEAPDQDNSQGEAEKISSSPAKTLVERAKEQKSMK 394

  Fly   311 HQQQQQQQLL----------------QSESSDQEQ----------------PAAGQDWSNLEPNG 343
            .:...|.:.|                |....::||                .||..:.:.:.||.
  Fly   395 EEGSDQPRSLNENHHQLELDDEDDDDQDHEEEEEQDIEELIHTTNELRRQAAAAAANAAAMSPNP 459

  Fly   344 SATPKLLSDGDANKQETEGGDESLPAVLTTAS-SSGTKKLEKIGERRER-HGKLRHARRLYEKSG 406
            |   ..||||..:...|:.|.|.:....::|. .|......|:.:..:| ...|:..|:|.....
  Fly   460 S---PCLSDGPEDLCTTKKGKELISGPSSSADCESNNNNSSKLQDNNQRIMLSLKDIRQLNANPN 521

  Fly   407 EDEVDPPKE--------------------EPDELPQPVEEIENE-HLVANRAESPRPTVVIPASF 450
            ...:..|..                    .||..|..:|.:|.: |..|..|             
  Fly   522 PTAIHTPTSCSGGNNGLLTFPPPGLRPPGLPDSPPCHMEALEAQMHAAAAAA------------- 573

  Fly   451 ACKYEGGVTAAGGGSGSGTGSGSLGSSYLINEHGM-LMAHEFAPNVASAAATAAV---------- 504
                   |.|||.|                 ||.. .|.|:...::|:|||.||:          
  Fly   574 -------VAAAGSG-----------------EHPFHHMEHQMEMSLAAAAAAAAMHQREPRDPRD 614

  Fly   505 -----AVAA-AAAAVANASAGNGNGGQ-DVSGSGTGAAADYPDIKLEDYDAAELRLTNEELSQ-- 560
                 |.|: ....:.....|..|||. ..||.|.|........:||:    .:...::||.:  
  Fly   615 GRDHNAFASNLLGPMGMPPFGGHNGGHPGNSGPGNGCPGQAAHERLEE----SMNRLSKELGKEF 675

  Fly   561 ----------------------------------------------------------------- 560
                                                                             
  Fly   676 GKEFGKEFGKEFGPASPMSLQGPFNAPDGPPHPPSPLPFPGMSSAMTLTPPHMFGLDSPLGLFPP 740

  Fly   561 -------WQDVIKMDD----------YLAK-------------GRRPQFWEEPFTKRVLDAIKNK 595
                   :..:::|.|          :|.|             |..|:.|........|..:.||
  Fly   741 GIDPGKLYNPLMEMSDPRDMPGGPPPFLKKKMPRPKGQHSAPRGGPPRSWTNTELTEALQHVWNK 805

  Fly   596 RLEMKKAARILGVSYGTLYGRYREVYG-----------CLKHP-----------YSGTAFRN--- 635
            ::...:|:||.|:.|.:|....|..||           |:..|           .||.:.:|   
  Fly   806 KMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIEMLQMGIGGGSGGSTKNEKS 870

  Fly   636 -----------------SGSTSTSQMGVQPRFDLGFRNGGVLPAQLELGKLKKDL 673
                             ||.::.||.|.........::.|.|.   .:|:|..||
  Fly   871 KERKEKEKDKNSMSSNGSGGSANSQGGAPTSGSGPMQHSGELG---PMGQLDLDL 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB_POZ_BAB-like 30..114 CDD:349624 32/83 (39%)
HTH_psq 587..622 CDD:283007 10/34 (29%)
lovNP_611994.3 BTB_POZ_BAB-like 139..222 CDD:349624 32/83 (39%)
HTH_psq 791..834 CDD:283007 12/42 (29%)

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