DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3726 and mamo

DIOPT Version :9

Sequence 1:NP_001284917.1 Gene:CG3726 / 31525 FlyBaseID:FBgn0029824 Length:682 Species:Drosophila melanogaster
Sequence 2:NP_572932.2 Gene:mamo / 32353 FlyBaseID:FBgn0267033 Length:1553 Species:Drosophila melanogaster


Alignment Length:599 Identity:151/599 - (25%)
Similarity:226/599 - (37%) Gaps:153/599 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 QQYCLRWKYHHSNLQTMFSQLLDRGCFCDVTLAC-EGQLIRAHRVVLCACSTFFDAVLSNYASER 67
            :.|||||..:.|||..:|||||..|...||||.| ||..||||:|||.|||::|.::...: .|.
  Fly     4 EHYCLRWNNYQSNLLGVFSQLLQDGSLVDVTLVCSEGTSIRAHKVVLSACSSYFQSLFLEH-PEG 67

  Fly    68 DPIIIMKDVTFAEVKCLIEFMYKGEINVEHSSLPSLLKTADDLKIKGLAEVTWRDDEDGPPPPMA 132
            ..|:|:|||.|||::.|:|||||||:||::..|.:|||||:.||:|||||:|             
  Fly    68 HLIVILKDVRFAELQTLVEFMYKGEVNVQYCQLSALLKTAESLKVKGLAEMT------------- 119

  Fly   133 AAEFHSPPRSLAESYAQDLILQHQQQQQQGPAAPPLNLHSSAALLERDRERERERDRERLSPGME 197
                                                  :.:..|      ||.||:.:||.|...
  Fly   120 --------------------------------------NQNTTL------REPEREPDRLRPQGG 140

  Fly   198 GVLGRMPVMTPLTGASGSAGVGSVSGGTSLEGVAPVEHFLGPKRKRGRPPLDDAYDVFNVRKLAQ 262
            |            |:.|||...:.|...:|:..|..:................:....:....|.
  Fly   141 G------------GSGGSAHKAADSPAAALDATAATQAATATATATAAAATSTSTSATSAAATAA 193

  Fly   263 YAANLEPA--------------QRAYLETARHFTEEPPLAAHAAS---MASPPAACPPKQRQRLR 310
            ..|....:              ..|...||...|.....||.::|   .::..||........:.
  Fly   194 ATAATSASTTATAAAGSSNTTTTTAATTTATCATAATSTAATSSSSSVTSAAAAAAAAASASGVA 258

  Fly   311 HQQQQQQQLLQS-----ESSDQEQPAAGQDWSNLEPNGSATPKLLSDGDANKQETEGGDESLPAV 370
            |.::.......:     |:||:..|...:..|.:.|...     :...:..:||....||.|...
  Fly   259 HSEEATSSSSSTGGQKREASDRSSPTPAKRSSRMHPADK-----VDVAEDREQEQNQADELLSEE 318

  Fly   371 L--TTASSSGTKKLEKIGERRERHGKLRHARRLYEKSGEDEVDPPKEEPDELPQPVEEIENEHLV 433
            |  ..........::::.|..|.  |||         |.||.|..::|.::.|.|::..:     
  Fly   319 LLGRNLKDEEDDDVDELDENEET--KLR---------GRDEDDDDEDEEEDTPMPLDLYQ----- 367

  Fly   434 ANRAESPRPTVVIPASFACKYEGGVTAAGGGSGSGTGSGSL-----GSSYLINEHGMLMAHEFAP 493
                   ||.|. |.|.|    ....|..|||.|.:||.:.     .|:...|.:....:.....
  Fly   368 -------RPNVE-PKSAA----AATAAQQGGSNSLSGSSNACHTNSSSNSNNNNNNNNNSSSNNN 420

  Fly   494 NVASAAATAAVAVAAAAAAVANASAGNGNGGQDVSGSGTGAAADYPDIKLEDYDAA---ELRLTN 555
            |..|:..|:|                :.|||...|| ||..:....|...:|.|..   :.::.:
  Fly   421 NNTSSGKTSA----------------SSNGGTASSG-GTADSVVAVDDDDDDDDGGHHHQRQVMD 468

  Fly   556 EELSQWQDVIKMDD 569
            :.|.|..|...:||
  Fly   469 DRLEQDVDEEDLDD 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3726NP_001284917.1 BTB 21..118 CDD:279045 55/97 (57%)
BTB 32..121 CDD:197585 51/89 (57%)
HTH_psq 587..622 CDD:283007
mamoNP_572932.2 BTB 21..118 CDD:279045 55/97 (57%)
BTB 32..118 CDD:197585 49/86 (57%)
C2H2 Zn finger 1082..1105 CDD:275368
C2H2 Zn finger 1116..1137 CDD:275368
C2H2 Zn finger 1149..1169 CDD:275368
zf-C2H2 1469..1491 CDD:278523
C2H2 Zn finger 1471..1491 CDD:275368
zf-H2C2_2 1483..1506 CDD:290200
C2H2 Zn finger 1499..1519 CDD:275368
zf-H2C2_2 1511..1536 CDD:290200
C2H2 Zn finger 1527..1547 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451902
Domainoid 1 1.000 68 1.000 Domainoid score I9675
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
44.030

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